Structure of PDB 6z86 Chain T Binding Site BS03

Receptor Information
>6z86 Chain T (length=186) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NELNLPNLAAAYSSILSSLGENPQRQGLLKTPWRAASAMQFFTKGYQETI
SDVLNDAIFDEDHDEMVIVKDIDMFSMCEHHLVPFVGKVHIGYLPNKQVL
GLSKLARIVEIYSRRLQVQERLTKQIAVAITEALRPAGVGVVVEATHMCM
VMRGVQKMNSKTVTSTMLGVFREDPKTREEFLTLIR
Ligand information
Ligand IDQBQ
InChIInChI=1S/C11H17N4O14P3/c12-11-13-8-4(9(18)14-11)1-2-15(8)10-7(17)6(16)5(27-10)3-26-31(22,23)29-32(24,25)28-30(19,20)21/h1-2,5-7,10,16-17H,3H2,(H,22,23)(H,24,25)(H2,19,20,21)(H3,12,13,14,18)/t5-,6-,7-,10-/m1/s1
InChIKeyNOXMCJDDSWCSIE-DAGMQNCNSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 2.0.7c1cn(c2c1C(=O)NC(=N2)N)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O
CACTVS 3.385NC1=Nc2n(ccc2C(=O)N1)[CH]3O[CH](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[CH](O)[CH]3O
CACTVS 3.385NC1=Nc2n(ccc2C(=O)N1)[C@@H]3O[C@H](CO[P](O)(=O)O[P](O)(=O)O[P](O)(O)=O)[C@@H](O)[C@H]3O
OpenEye OEToolkits 2.0.7c1cn(c2c1C(=O)NC(=N2)N)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OP(=O)(O)O)O)O
FormulaC11 H17 N4 O14 P3
Name7-deaza-GTP;
[[(2~{R},3~{S},4~{R},5~{R})-5-(2-azanyl-4-oxidanylidene-3~{H}-pyrrolo[2,3-d]pyrimidin-7-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate
ChEMBLCHEMBL4553467
DrugBank
ZINC
PDB chain6z86 Chain T Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6z86 A hybrid approach reveals the allosteric regulation of GTP cyclohydrolase I.
Resolution2.206 Å
Binding residue
(original residue number in PDB)
N118 F122 G164 L165 S166 K167 R170
Binding residue
(residue number reindexed from 1)
N55 F59 G101 L102 S103 K104 R107
Annotation score3
Binding affinityMOAD: Kd=798uM
Enzymatic activity
Catalytic site (original residue number in PDB) C141 E142 H143 H144 Q182 H210 C212
Catalytic site (residue number reindexed from 1) C78 E79 H80 H81 Q119 H147 C149
Enzyme Commision number 3.5.4.16: GTP cyclohydrolase I.
Gene Ontology
Molecular Function
GO:0003934 GTP cyclohydrolase I activity
Biological Process
GO:0046654 tetrahydrofolate biosynthetic process

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Molecular Function

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Biological Process
External links
PDB RCSB:6z86, PDBe:6z86, PDBj:6z86
PDBsum6z86
PubMed33229582
UniProtP30793|GCH1_HUMAN GTP cyclohydrolase 1 (Gene Name=GCH1)

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