Structure of PDB 8g60 Chain Sd Binding Site BS03
Receptor Information
>8g60 Chain Sd (length=55) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GHQQLYWSHPRKFGQGSRSCRVCSNRHGLIRKYGLNMCRQCFRQYAKDIG
FIKLD
Ligand information
Ligand ID
ZN
InChI
InChI=1S/Zn/q+2
InChIKey
PTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
Software
SMILES
CACTVS 3.341
[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
Formula
Zn
Name
ZINC ION
ChEMBL
CHEMBL1236970
DrugBank
DB14532
ZINC
PDB chain
8g60 Chain Sd Residue 201 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8g60
mRNA decoding in human is kinetically and structurally distinct from bacteria.
Resolution
2.54 Å
Binding residue
(original residue number in PDB)
C21 C24 C39 C42
Binding residue
(residue number reindexed from 1)
C20 C23 C38 C41
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003735
structural constituent of ribosome
GO:0008270
zinc ion binding
GO:0046872
metal ion binding
Biological Process
GO:0002181
cytoplasmic translation
GO:0006412
translation
Cellular Component
GO:0005654
nucleoplasm
GO:0005737
cytoplasm
GO:0005783
endoplasmic reticulum
GO:0005791
rough endoplasmic reticulum
GO:0005829
cytosol
GO:0005840
ribosome
GO:0005925
focal adhesion
GO:0015935
small ribosomal subunit
GO:0022626
cytosolic ribosome
GO:0022627
cytosolic small ribosomal subunit
GO:0070062
extracellular exosome
GO:0098556
cytoplasmic side of rough endoplasmic reticulum membrane
GO:1990904
ribonucleoprotein complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:8g60
,
PDBe:8g60
,
PDBj:8g60
PDBsum
8g60
PubMed
37020024
UniProt
P62273
|RS29_HUMAN Small ribosomal subunit protein uS14 (Gene Name=RPS29)
[
Back to BioLiP
]