Structure of PDB 8vs9 Chain SMPB Binding Site BS03
Receptor Information
>8vs9 Chain SMPB (length=150) Species:
562
(Escherichia coli) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SATIALNKRARHEYFIEEEFEAGLALQGWEVKSLRAGKANISDSYVLLRD
GEAFLFGANITPMAVASTHVVCDPTRTRKLLLNQRELDSLYGRVNREGYT
VVALSLYWKNAWCKVKIGVAKGKKQHDKRSDIKEREWQVDKARIMKNAHR
Ligand information
>8vs9 Chain ATRN (length=76) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ggggcuauagcucagcugggagagcgccugcuuugcacgcaggaggucug
cgguucgaucccgcauagcuccacca
<<<<<<<..<<<<........>>>>.<<<<<.......>>>>>.....<<
<<<.......>>>>>>>>>>>>....
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
8vs9
Endogenous trans-translation structure visualizes the decoding of the first tmRNA alanine codon.
Resolution
3.9 Å
Binding residue
(original residue number in PDB)
H79 V80 V81
Binding residue
(residue number reindexed from 1)
H69 V70 V71
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003723
RNA binding
View graph for
Molecular Function
External links
PDB
RCSB:8vs9
,
PDBe:8vs9
,
PDBj:8vs9
PDBsum
8vs9
PubMed
38500588
UniProt
A0A2X1N680
[
Back to BioLiP
]