Structure of PDB 6j6g Chain S Binding Site BS03
Receptor Information
>6j6g Chain S (length=70) Species:
559292
(Saccharomyces cerevisiae S288C) [
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TSHRPQLEARSGAKAAAYTPTGIEHARLLPGHTTLKYRKSWRKGTAFGRG
YINDMTKSEYHQEFLHKHVR
Ligand information
>6j6g Chain L (length=208) [
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acgaaucucuuugccuuuuggcuuagaucaaguguaguaucuguucuuuu
cauguaacaacuaaugaccucagaggcucaauuuguuacaauacacauuu
uuuggcacccaaaauaggacgggaagagacuuuuaaagugagacgucgcg
acccucgcaggagucguucuugacuuuuuggucgcuugauguuucucucu
ucccguuc
..................................................
..<<<<<<<<.....<.<<<<.>>>>.>....>>>>>>>>..........
.................<<<<<<<<<<.<<<<<.>>>>><<<<<<<<<<<
<.<<......<<<<<<....>>>>>>...>>>>>>..>>>>>>>>..>>>
>>>>>>>.
Receptor-Ligand Complex Structure
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PDB
6j6g
Structures of the Catalytically Activated Yeast Spliceosome Reveal the Mechanism of Branching.
Resolution
3.2 Å
Binding residue
(original residue number in PDB)
H5 R6 P7 L9
Binding residue
(residue number reindexed from 1)
H3 R4 P5 L7
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003674
molecular_function
GO:0003723
RNA binding
GO:0005515
protein binding
Biological Process
GO:0000398
mRNA splicing, via spliceosome
GO:0006397
mRNA processing
GO:0008380
RNA splicing
GO:0045292
mRNA cis splicing, via spliceosome
Cellular Component
GO:0005634
nucleus
GO:0005681
spliceosomal complex
GO:0005684
U2-type spliceosomal complex
GO:0071013
catalytic step 2 spliceosome
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Cellular Component
External links
PDB
RCSB:6j6g
,
PDBe:6j6g
,
PDBj:6j6g
PDBsum
6j6g
PubMed
30879786
UniProt
Q03772
|CWC15_YEAST Pre-mRNA-splicing factor CWC15 (Gene Name=CWC15)
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