Structure of PDB 4iuc Chain S Binding Site BS03
Receptor Information
>4iuc Chain S (length=265) Species:
381666
(Cupriavidus necator H16) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
PRTPVLWLHGLECTCCSESFIRSAHPLAKDVVLSMISLDYDDTLMAAAGH
QAEAILEEIMTKYKGNYILAVEGNPPLNQDGMSCIIGGRPFIEQLKYVAK
DAKAIISWGSCASWGCVQAAKPNPTQATPVHKVITDKPIIKVPGCPPIAE
VMTGVITYMLTFDRIPELDRQGRPKMFYSQRIHDKCYRRPHFDAGQFVEE
WDDESARKGFCLYKMGCKGPTTYNACSTTRWNEGTSFPIQSGHGCIGCSE
DGFWDKGSFYDRLTG
Ligand information
Ligand ID
S3F
InChI
InChI=1S/4Fe.H2O.3S/h;;;;1H2;;;/q;;;+1;;;;/p-1
InChIKey
ROWMPBKAWWBNCP-UHFFFAOYSA-M
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
[O][Fe]1[S]([Fe]2[S]1[Fe]S2)[Fe]
CACTVS 3.370
O|[Fe]|1S|2[Fe]S[Fe]|2S|1[Fe]
Formula
Fe4 O S3
Name
oxidized [Fe4-S3] cluster
ChEMBL
DrugBank
ZINC
PDB chain
4iuc Chain S Residue 1003 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4iuc
Reversible [4Fe-3S] cluster morphing in an O2-tolerant [NiFe] hydrogenase.
Resolution
1.45 Å
Binding residue
(original residue number in PDB)
C17 T18 C19 C20 E76 S114 C115 C120 C149
Binding residue
(residue number reindexed from 1)
C13 T14 C15 C16 E72 S110 C111 C116 C145
Annotation score
1
Enzymatic activity
Catalytic site (original residue number in PDB)
C149 P242 C249 C252
Catalytic site (residue number reindexed from 1)
C145 P238 C245 C248
Enzyme Commision number
1.12.99.6
: hydrogenase (acceptor).
Gene Ontology
Molecular Function
GO:0005515
protein binding
GO:0008901
ferredoxin hydrogenase activity
GO:0009055
electron transfer activity
GO:0016491
oxidoreductase activity
GO:0033748
hydrogenase (acceptor) activity
GO:0046872
metal ion binding
GO:0051536
iron-sulfur cluster binding
GO:0051538
3 iron, 4 sulfur cluster binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0009061
anaerobic respiration
Cellular Component
GO:0005886
plasma membrane
GO:0009375
ferredoxin hydrogenase complex
GO:0016020
membrane
GO:0044569
[Ni-Fe] hydrogenase complex
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:4iuc
,
PDBe:4iuc
,
PDBj:4iuc
PDBsum
4iuc
PubMed
24705592
UniProt
P31892
|MBHS_CUPNH Uptake hydrogenase small subunit (Gene Name=hoxK)
[
Back to BioLiP
]