Structure of PDB 3bgo Chain S Binding Site BS03

Receptor Information
>3bgo Chain S (length=263) Species: 1390 (Bacillus amyloliquefaciens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VSYGVAQIKAPALHSQGYTGSNVKVAVLASGIDSSHPDLNVAGGASFVPS
ETNPFQDNNSHGTHVAGTVLAVAPSASLYAVKVLGADGSGQASWIINGIE
WAIANNMDVINMSLGSPSGSAALKAAVDKAVASGVVVVAAAGNSGTSGSS
STVSYPAKYPSVIAVGAVDSSNQRAPFSSVGPELDVMAPGVSICSTLPGG
KYGALSGTAMASPHVAGAAALILSKHPNWTNTQVRSSLENTATKLGDSFY
YGKGLINVEAAAQ
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain3bgo Chain S Residue 280 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB3bgo Structure of a switchable subtilisin complexed with a substrate and with the activator azide.
Resolution1.8 Å
Binding residue
(original residue number in PDB)		H39 D41
Binding residue
(residue number reindexed from 1)		H36 D38
Annotation score4
Enzymatic activity
Catalytic site (original residue number in PDB) A221
Catalytic site (residue number reindexed from 1) A209
Enzyme Commision number 3.4.21.62: subtilisin.
Gene Ontology
Molecular Function
GO:0004252 serine-type endopeptidase activity
GO:0008236 serine-type peptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:3bgo, PDBe:3bgo, PDBj:3bgo
PDBsum3bgo
PubMed19761257
UniProtP00782|SUBT_BACAM Subtilisin BPN' (Gene Name=apr)

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