Structure of PDB 1dv3 Chain S Binding Site BS03
Receptor Information
>1dv3 Chain S (length=299) Species:
1063
(Cereibacter sphaeroides) [
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YQNIFSQVQVRGPADLGMTEDVNLANRSGVGPFSTLLGWFGNAQLGPIYL
GSLGVLSLFSGLMWFFTIGIWFWYQAGWNPAVFLRDLFFFSLEPPAPEYG
LSFAAPLKEGGLWLIASFFMFVAVWSWWGRTYLRAQALGMGKHTAWAFLS
AIWLWMVLGFIRPILMGSWSEAVPYGIFSHLDWTNNFSLVHGNLFYNPFH
GLSIAFLYGSALLFAMHGATILAVSRFGGERELEQIADRGTAAERAALFW
RWTMGFNATMEGIHRWAIWMAVLVTLTGGIGILLSGTVVDNWYVWGQNH
Ligand information
Ligand ID
FE2
InChI
InChI=1S/Fe/q+2
InChIKey
CWYNVVGOOAEACU-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Fe+2]
CACTVS 3.341
[Fe++]
Formula
Fe
Name
FE (II) ION
ChEMBL
DrugBank
DB14510
ZINC
PDB chain
1dv3 Chain S Residue 2007 [
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Receptor-Ligand Complex Structure
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PDB
1dv3
Determination of the binding sites of the proton transfer inhibitors Cd2+ and Zn2+ in bacterial reaction centers.
Resolution
2.5 Å
Binding residue
(original residue number in PDB)
H219 E234 H266
Binding residue
(residue number reindexed from 1)
H217 E232 H264
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0042314
bacteriochlorophyll binding
GO:0045156
electron transporter, transferring electrons within the cyclic electron transport pathway of photosynthesis activity
GO:0046872
metal ion binding
Biological Process
GO:0009772
photosynthetic electron transport in photosystem II
GO:0015979
photosynthesis
GO:0019684
photosynthesis, light reaction
Cellular Component
GO:0016020
membrane
GO:0030077
plasma membrane light-harvesting complex
GO:0042717
plasma membrane-derived chromatophore membrane
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Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:1dv3
,
PDBe:1dv3
,
PDBj:1dv3
PDBsum
1dv3
PubMed
10677497
UniProt
P0C0Y9
|RCEM_CERSP Reaction center protein M chain (Gene Name=pufM)
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