Structure of PDB 9cf2 Chain P Binding Site BS03

Receptor Information
>9cf2 Chain P (length=726) Species: 35722,83333 [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PSKRVITIKTTIKGIWKYDYRQPLYDLVHTTNLLVTHTYAFTKYIFLKEL
ATDENFAFNELITKDFFVEVFLSLVSAKAGNSERLKDTTKRYRSLIGKHK
DAYFEDAKYTPISLAYAQQIALYECAKVQTAYFNNMKAHFGNRLRALINK
LFKKKEKVESLTKEMEANNFSIKEIKQAIRKNVYQPCNQVKLAITKKNMP
ESGLLDDKSVTQLNEFFSMYAVDYTFQKESIFYDVVANPEKHFKAFYKLA
QLSEAYEVKPFACFPLRRTFIPCYMTVDSKILNYHILKNKKVLKMDEKFN
AWGRVVNLERKAFKSQGCKKTLHFQGTLETDGVGVSILKQNTDTNRKYIE
KLEDAELKQTLGKCVLMDPGRRDLLYCMKETSRADKKEIMIFTKNDRSKC
SRHFRRLRKLLQPSQIREAETYLSGFATKSVNMEKFVEYIQARASVKDIL
YEYYGNETAKSITEFYPESQFDFKVDQKCNLYYENLFVAKIRGFYPQPEH
EPNDITLKSHMYHTYLQIMLNQKHISERLNSEKRRKIEDLAKAILEQPHE
SGHKTTISSLLGKLRLLPFRKMKFSTKLFSDNNDRKLVKNIKKKFGADAV
LVLGNWSAPNTKYQDPTRNKGLRRMLKKNGFPLYLIDEFRTSSFCPKCES
DLEKFKVIPNPRPHNQEKQPKVLCHGLLRCKNMSCLEQQTSEGNQRLWNR
DQAAVLNFRKILNCLRETKQRPPLFS
Ligand information
>9cf2 Chain W (length=58) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uccaccaaaguuaucgcuuuggucaauuaaugcagguaagcaacauccag
caaacaga
...<<<<<<<......>>>>>>>.......<<<......>>>........
........
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9cf2 Structural insights into the diversity and DNA cleavage mechanism of Fanzor.
Resolution3.15 Å
Binding residue
(original residue number in PDB)		V107 T109 I110 K111 T113 K115 G116 A233 N237 H241 F363 A364 L368 R369 Y376 K413 K416 Q418 K422 E431 S438 R490 S500 K505 I507 N513 K517 R520 R523 R524 L525 K527 L529 R535 T539 K596 N598 Y600 L604 F605 K608 R646 L682 L685 P686 K689 L696 R703 N728 K730 Y731 Q732 P734 P779 H782 G794 Q813 R814 L815 N817 Q820
Binding residue
(residue number reindexed from 1)		V5 T7 I8 K9 T11 K13 G14 A131 N135 H139 F261 A262 L266 R267 Y274 K311 K314 Q316 K320 E329 S336 R372 S382 K387 I389 N395 K399 R402 R405 R406 L407 K409 L411 R417 T421 K478 N480 Y482 L486 F487 K490 R528 L564 L567 P568 K571 L578 R585 N610 K612 Y613 Q614 P616 P661 H664 G676 Q695 R696 L697 N699 Q702
External links
PDB RCSB:9cf2, PDBe:9cf2, PDBj:9cf2
PDBsum9cf2
PubMed39208796
UniProtA0A0B7NJM7;
P0AEX9|MALE_ECOLI Maltose/maltodextrin-binding periplasmic protein (Gene Name=malE)

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