Structure of PDB 9cet Chain P Binding Site BS03

Receptor Information
>9cet Chain P (length=609) Species: 83333,905079 [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SNIRIVKRKAKGFFKCEDLVTIKDAVKAAHRIMSDASILVRSYYLRWFQS
SYPLDSDDKELELEHFHISMACSIVQGITRPPVRGVGPEQSVKIDVFNDM
LDEYKRLYERAPNDKENETDLSLSHVLAYSIDNLLTAYKNNIEAHFSKYV
KRFIRCDMLAKGFNKSEANRVAAIYTNAYIYSSLFPSKINKGGFPRVYDL
KANPWVYLPKMVMINQALETDFSSVEHKERRLLNPLPFYSSFVPMHIRID
TSGLSQLLMTKDRLDDFKRSYLAEFGVSLNIKNKGDMLASFEKIFGRKAT
SNREAGLYATEMWSFLTNLKTCRQWKELDGVVRKNDPKGTQWMFDNAVVT
DGVSISFQVIDNSMFGRKAFSREELKTSKLLGCDPGKRDILAITDGIKTI
CYTKGQRDMDTHKTIRLRTSLKRRRGCGLEEYETQVMNRFQKRSCHPEMF
RRYACSRKRMEHMLLECYSHPVFREFKFLVYNKTKSSEHRFMHRVLETFK
RPQTNLSKARCASGVMRMNALKEVQRHGDIIIGWGNWIRRRFESLFKTTT
VPEHYTSQECPSCKGRCLRKATGNPIMRHHLLRCTNDSCCSRWWNRNVAG
AFNILTRLL
Ligand information
>9cet Chain W (length=104) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
auccgguaacgaaacuaccggagacggguuaggaggugacgaccucuaaa
accuagaacuuagagugcaaauacgaguguaaaagcacucuaaggagugg
ccuu
.<<<<<<<.......>>>>>>>...<<<<..<<<<........>>>>...
>>>>....<<<<<<<<<<....<<<..>>>....>>>>>>>>>>......
....
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB9cet Structural insights into the diversity and DNA cleavage mechanism of Fanzor.
Resolution3.0 Å
Binding residue
(original residue number in PDB)		R5 I6 K8 R9 K10 K12 N134 H146 K149 R153 R253 L255 N256 P259 Y261 M267 H268 R345 R355 K356 N357 R431 K441 T446 Q449 H455 I458 R461 T462 K465 R466 R486 H513 P514 V515 E518 F519 K520 F521 L522 Y524 N525 K528 S529 H532 R533 H536 R537 K551 A552 R553 C554 R639 H641 L642 S652 R653 W654 W655 N656
Binding residue
(residue number reindexed from 1)		R4 I5 K7 R8 K9 K11 N133 H145 K148 R152 R231 L233 N234 P237 Y239 M245 H246 R323 R333 K334 N335 R388 K398 T403 Q406 H412 I415 R418 T419 K422 R423 R443 H470 P471 V472 E475 F476 K477 F478 L479 Y481 N482 K485 S486 H489 R490 H493 R494 K508 A509 R510 C511 R578 H580 L581 S591 R592 W593 W594 N595
External links
PDB RCSB:9cet, PDBe:9cet, PDBj:9cet
PDBsum9cet
PubMed39208796
UniProtL1JXG4;
P0AEX9|MALE_ECOLI Maltose/maltodextrin-binding periplasmic protein (Gene Name=malE)

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