Structure of PDB 6zj3 Chain Lc Binding Site BS03

Receptor Information
>6zj3 Chain Lc (length=203) Species: 3039 (Euglena gracilis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GRRPAKCYRYCKNKAYPKSRYCRGVPEAKIRIYDCGMRKLNADTFPLTYH
LISMEREQIGSEALEAARINANKYMIKNAGKEAYHIRVRVHPFHVCRINK
MLGMRGAFGKPNGLAARVRIGQPLMSIRVKPQHEAVVVAALKRASYKFAG
RQVIAKSTMWGFTEIRSENYVKWKEEGKFRVDGVSTKILRNRGRLHRAKR
VRA
Ligand information
>6zj3 Chain LI (length=573) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggugcgagccugcagugaaauaccacuaccuucaccguuguuuuacucau
cgaguugcaagagagcgguggccaugcuuuccccgauucaugcaccaagu
cugcagcagcuguuguggacgacucacgugucacaguccgaucagucucg
aaacaucgaucaguuggggaguuuggcuggggcggcacgccuuuuacaac
acaacgaaggcguccugaagcauugcucaggcagaacagaaaucucccag
ggaggagaaggccaaaggugcugcugaugcugcgacucucaguacgaguc
cgaaacgugcaaucguggccuaacgauccuuuggucaagugugcgaauuc
uggauaucgaagccagaggugucagaaaaauuaccacagggauaacuggc
uuguggcugccaagcguucaaagcgacgucgcuuuuugauccuucgaugu
cggcucuuccuagcuucccacccgcagccgaguggaagaguuggauuguu
cacccaccaacagggaacgugagcuggguuuagaccgucgugagacaggu
ugguuuuacccuccugccacaga
.................................................<
<<<<......<<<..<<<.<<.........>>>>>.............<<
<<<<<<<<..>>>>>>>>>>..>>>...<......>..........>>>>
>........................<<<.....>>>..<<<<<<......
.....>>>>>>..<<....<<<.<<<...<<.<<<.......>>>.>>..
...<<...(((>>....>>>.>>>.........<<<<<.......>>>>>
.....<<......>>.>>))).......<<<<<<<............<<<
........>>>>>>>>>>.............................<<.
<...<<<.<<...<<.......>>...>>.>>>....>.>.>.......<
<<<<.<<<<<<..<<<<<.<<.<......>.>>>>..>>>.<<<......
...>>>.....>>>>>..>...>>>.>>....<<<<<<<....>>>.>>>
>......................
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6zj3 Cryo-EM structure of the highly atypical cytoplasmic ribosome of Euglena gracilis.
Resolution3.15 Å
Binding residue
(original residue number in PDB)		R4 A6 C8 K15 R24 E63 A64 K74 L103 G114 M115 R116 F119 R154 Y157 K158
Binding residue
(residue number reindexed from 1)		R3 A5 C7 K14 R23 E62 A63 K73 L102 G103 M104 R105 F108 R143 Y146 K147
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003735 structural constituent of ribosome
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6zj3, PDBe:6zj3, PDBj:6zj3
PDBsum6zj3
PubMed33091122
UniProtQ39724|RL10_EUGGR Large ribosomal subunit protein uL16 (Gene Name=RPL10)

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