Structure of PDB 8fl2 Chain L6 Binding Site BS03

Receptor Information
>8fl2 Chain L6 (length=203) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VLKPHFHKDWQRRVATWFNQPARKIRRRKARQAKARRIAPRPASGPIRPI
VRCPTVRYHTKVRAGRGFSLEELRVAGIHKKVARTIGISVDPRRRNKSTE
SLQANVQRLKEYRSKLILFPRKPSAPKKGDSSAEELKLATQLTGPVMPVR
NVYKKEKARVITEEEKNFKAFASLRMARANARLFGIRAKRAKEAAEQDVE
KKK
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain8fl2 Chain L6 Residue 301 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB8fl2 Principles of human pre-60 S biogenesis.
Resolution2.67 Å
Binding residue
(original residue number in PDB)		K11 H13
Binding residue
(residue number reindexed from 1)		K3 H5
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0005515 protein binding
Biological Process
GO:0001824 blastocyst development
GO:0002181 cytoplasmic translation
GO:0006412 translation
GO:0060348 bone development
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005783 endoplasmic reticulum
GO:0005829 cytosol
GO:0005840 ribosome
GO:0016020 membrane
GO:0022625 cytosolic large ribosomal subunit
GO:0022626 cytosolic ribosome
GO:0045202 synapse
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8fl2, PDBe:8fl2, PDBj:8fl2
PDBsum8fl2
PubMed37410842
UniProtP26373|RL13_HUMAN Large ribosomal subunit protein eL13 (Gene Name=RPL13)

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