Structure of PDB 8dh1 Chain L Binding Site BS03

Receptor Information
>8dh1 Chain L (length=702) Species: 10760 (Escherichia phage T7) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
INIAKNDFSDIELAAIPFNTLADHYGERLAREQLALEHESYEMGEARFRK
MFERQLKAGEVADNAAAKPLITTLLPKMIARIKPEAVAYITIKTTLACLT
SNTTVQAVASAIGRAIEDEARKEDSIHVGVRCIEMLIESTGETIELAPEY
AEAIATRAGALAGISPMFQPCVVPPKPWTGITGGGYWANGRRPLALVRTH
SKKALMRYEDVYMPEVYKAINIAQNTAWKINKKVLAVANVITKWKHCPVE
DIPLTAWKRAAAAVYRKDKARKSRRISLEFMLEQANKFANHKAIWFPYNM
DWRGRVYAVSMFNPQGNDMTKGLLTLAKGKPIGKEGYYWLKIHGANCAGV
DKVPFPERIKFIEENHENIMACAKSPLENTWWAEQDSPFCFLAFCFEYAG
VQHHGLSYNCSLPLAFDGSCSGIQHFSAMLRDEVGGRAVNLLPSETVQDI
YGIVAKKVNEILQADAINGTDRSVTKRSVMTLAYGSKEFGFRQQVLEDTI
QPAIDSGKGLMFTGYMAKLIWESVSVTVVAAVEAMNWLKSAAKLLAAEVK
DKKTGEILRKRCAVHWVTPDGFPVWQEYKKPIQTRDSEIDAHKQESGIAP
NFVHSQDGSHLRKTVVWAHEKYGIESFALIHDSFGTIPADAANLFKAVRE
TMVDTYESCDVLADFYDQFADQLHESQLDKMPALPAKGNLNLRDILESDF
AF
Ligand information
Receptor-Ligand Complex Structure
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PDB8dh1 Structural basis of transcription recognition of a hydrophobic unnatural base pair by T7 RNA polymerase.
Resolution2.65 Å
Binding residue
(original residue number in PDB)		E643 K679 K704
Binding residue
(residue number reindexed from 1)		E488 K518 K543
Enzymatic activity
Enzyme Commision number 2.7.7.6: DNA-directed RNA polymerase.
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0016779 nucleotidyltransferase activity
GO:0034062 5'-3' RNA polymerase activity
Biological Process
GO:0006351 DNA-templated transcription
GO:0019083 viral transcription
GO:0039695 DNA-templated viral transcription
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8dh1, PDBe:8dh1, PDBj:8dh1
PDBsum8dh1
PubMed36635281
UniProtP00573|RPOL_BPT7 T7 RNA polymerase (Gene Name=1)

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