Structure of PDB 5y88 Chain L Binding Site BS03

Receptor Information
>5y88 Chain L (length=157) Species: 559292 (Saccharomyces cerevisiae S288C) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MPRIKTRRSKPAPDGFEKIKPTLTDFEIQLRDAQKDKSSKLAAKSNEQLW
EIMQLHHQRSRYIYTLYYKRKAISKDLYDWLIKEKYADKLLIAKWRKTGY
EKLCCLRCIQKNETNNGSTCICRVPRAQLEEEARKKGTQVSFHQCVHCGC
RGCASTD
Ligand information
>5y88 Chain S (length=23) Species: 559292 (Saccharomyces cerevisiae S288C) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
FTKSELKRRRKTRKGDGPWGSWS
Receptor-Ligand Complex Structure
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PDB5y88 Structure of an Intron Lariat Spliceosome from Saccharomyces cerevisiae
Resolution3.46 Å
Binding residue
(original residue number in PDB)		Q54 H57 R126 A127 R151 T156 D157
Binding residue
(residue number reindexed from 1)		Q54 H57 R126 A127 R151 T156 D157
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003674 molecular_function
GO:0005515 protein binding
Biological Process
GO:0000282 cellular bud site selection
GO:0000398 mRNA splicing, via spliceosome
GO:0006397 mRNA processing
GO:0008380 RNA splicing
Cellular Component
GO:0005634 nucleus
GO:0005681 spliceosomal complex
GO:0005686 U2 snRNP

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:5y88, PDBe:5y88, PDBj:5y88
PDBsum5y88
PubMed28919079
UniProtP25337|BUD31_YEAST Pre-mRNA-splicing factor BUD31 (Gene Name=BUD31)

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