Structure of PDB 6sgc Chain J2 Binding Site BS03

Receptor Information
>6sgc Chain J2 (length=170) Species: 9986 (Oryctolagus cuniculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KENPMRELRIRKLCLNICVGESGDRLTRAAKVLEQLTGQTPVFSKARYTV
RSFGIRRNEKIAVHCTVRGAKAEEILEKGLKVREYELRKNNFSDTGNFGF
GIQEHIDLGIKYDPSIGIYGLDFYVVLGRPGFSIADKKRRTGCIGAKHRI
SKEEAMRWFQQKYDGIILPG
Ligand information
>6sgc Chain 23 (length=76) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
gcccgcauagcucagccgguagagcaucagacuuuuaaucugagggucca
ggguucaagucccuguucgggcgcca
<<<<<....<<<<........>>>>.<<<<<.......>>>>>.....<<
<<<.......>>>>>..>>>>>....
Receptor-Ligand Complex Structure
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PDB6sgc Mechanism of ribosome stalling during translation of a poly(A) tail.
Resolution2.8 Å
Binding residue
(original residue number in PDB)		T56 R58
Binding residue
(residue number reindexed from 1)		T49 R51
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005634 nucleus
GO:0005730 nucleolus
GO:0005737 cytoplasm
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6sgc, PDBe:6sgc, PDBj:6sgc
PDBsum6sgc
PubMed31768042
UniProtG1TUB8|RL11_RABIT Large ribosomal subunit protein uL5 (Gene Name=RPL11)

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