Structure of PDB 6uxn Chain J Binding Site BS03

Receptor Information
>6uxn Chain J (length=79) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SSTMGQVGRQLAIIGDDINRRYDSEFQTMLQHLQPTAENAYEYFTKIATS
LFESGINWGRVVALLGFGYRLALHVYQHG
Ligand information
Ligand ID8SP
InChIInChI=1S/C22H42NO10P/c1-3-5-7-9-11-13-20(24)30-15-18(33-21(25)14-12-10-8-6-4-2)16-31-34(28,29)32-17-19(23)22(26)27/h18-19H,3-17,23H2,1-2H3,(H,26,27)(H,28,29)/t18-,19+/m1/s1
InChIKeyTWOCGGYLNFTSJO-MOPGFXCFSA-N
SMILES
SoftwareSMILES
CACTVS 3.370CCCCCCCC(=O)OC[CH](CO[P](O)(=O)OC[CH](N)C(O)=O)OC(=O)CCCCCCC
OpenEye OEToolkits 1.7.6CCCCCCCC(=O)OCC(COP(=O)(O)OCC(C(=O)O)N)OC(=O)CCCCCCC
OpenEye OEToolkits 1.7.6CCCCCCCC(=O)OC[C@H](COP(=O)(O)OC[C@@H](C(=O)O)N)OC(=O)CCCCCCC
CACTVS 3.370CCCCCCCC(=O)OC[C@H](CO[P](O)(=O)OC[C@H](N)C(O)=O)OC(=O)CCCCCCC
ACDLabs 12.01O=C(OC(COP(=O)(OCC(C(=O)O)N)O)COC(=O)CCCCCCC)CCCCCCC
FormulaC22 H42 N O10 P
NameO-[(R)-{[(2R)-2,3-bis(octanoyloxy)propyl]oxy}(hydroxy)phosphoryl]-L-serine
ChEMBL
DrugBank
ZINC
PDB chain6uxn Chain J Residue 201 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6uxn BAK core dimers bind lipids and can be bridged by them.
Resolution2.49 Å
Binding residue
(original residue number in PDB)
A104 E105 N106 Y108 E109 F111 G135
Binding residue
(residue number reindexed from 1)
A37 E38 N39 Y41 E42 F44 G68
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0042981 regulation of apoptotic process

View graph for
Biological Process
External links
PDB RCSB:6uxn, PDBe:6uxn, PDBj:6uxn
PDBsum6uxn
PubMed32929280
UniProtQ16611|BAK_HUMAN Bcl-2 homologous antagonist/killer (Gene Name=BAK1)

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