Structure of PDB 3foo Chain I Binding Site BS03

Receptor Information
>3foo Chain I (length=106) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ADLEDNMETLNDNLKVIEKADNAAQVKDALTKMRAAALDAQKATPPKLED
KSPDSPEMCDFAAGFHILVGQIDDALHLANEGKVKEAQAAAEQLKTTCNA
CHQKYR
Ligand information
Ligand IDPXX
InChIInChI=1S/C14H11N3O/c1-9(18)17-12-8-10-4-2-6-15-13(10)14-11(12)5-3-7-16-14/h2-8H,1H3,(H,17,18)
InChIKeyAAJXINSCZMZERD-UHFFFAOYSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0CC(=O)Nc1cc2cccnc2c3c1cccn3
CACTVS 3.341CC(=O)Nc1cc2cccnc2c3ncccc13
ACDLabs 10.04O=C(Nc2cc1cccnc1c3ncccc23)C
FormulaC14 H11 N3 O
NameN-1,10-phenanthrolin-5-ylacetamide
ChEMBL
DrugBankDB08440
ZINCZINC000053683165
PDB chain3foo Chain I Residue 151 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3foo A superprotein triangle driven by nickel(II) coordination: exploiting non-natural metal ligands in protein self-assembly
Resolution2.4 Å
Binding residue
(original residue number in PDB)
Q41 K42 P53 M58 C59
Binding residue
(residue number reindexed from 1)
Q41 K42 P53 M58 C59
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005506 iron ion binding
GO:0009055 electron transfer activity
GO:0020037 heme binding
GO:0046872 metal ion binding
Biological Process
GO:0022900 electron transport chain
Cellular Component
GO:0042597 periplasmic space

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component
External links
PDB RCSB:3foo, PDBe:3foo, PDBj:3foo
PDBsum3foo
PubMed19527025
UniProtP0ABE7|C562_ECOLX Soluble cytochrome b562 (Gene Name=cybC)

[Back to BioLiP]