Structure of PDB 5tx1 Chain H Binding Site BS03

Receptor Information

>5tx1 Chain H (length=947) Species: 46928 (Human adenovirus 26) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MMPQWAYMHIAGQDASEYLSPGLVQFARATDTYFSLGNKFRNPTVAPTHD
VTTDRSQRLTLRFVPVDREATTYLYKARFTLAVGDNRVLDMASTYFDIRG
VLDRGPSFKPYSGTAYNSLAPKGAPNPSQWETKEKQGTTGGVQQEKDVTK
TFGVAATGGINITNQGLLLGTDETAENGKKDIYADKTFQPEPQVGEENWQ
ENEAFYGGRALKKDTKMKPCYGSFARPTNEKGGQAKFKPVNEGEQPKDLD
IDFAYFDVPGGSPPAGGSGEEYKADIILYTENVNLETPDTHVVYKPGTSD
NSSEINLVQQSMPNRPNYIGFRDNFVGLMYYNSTGNMGVLAGQASQLNAV
VDLQDRNTELSYQLLLDSLGDRTRYFSMWNSAVDSYDPDVRIIENHGVED
ELPNYCFPLNGTGTNSTYQGVKITNGNDGAEESEWEKDDAISRQNQICKG
NVYAMEINLQANLWKSFLYSNVALYLPDSYKYTPANVKLPANTNTYEYMN
GRVVAPSLVDAYINIGARWSLDPMDNVNPFNHPRNAGLRYRSMLLGNGRY
VPFHIQVPQKFFAIKNLLLLPGSYTYEWNFRKDVNMILQSSLGNDLRVDG
ASVRFDSVNLYATFFPMAHNTASTLEAMLRNDTHDQSFNDYLSAANMLYP
IPAKATNVPISIPSRNWAAFRGWSFTRLKTKETPSLGSGFDPYFVYSGSI
PYLDGTFYLNHTFKKVSIMFDSSVSWPGNDRLLTPNEFEIKRSVDGEGYN
VAQCNMTKDWFLVQMLSHYNIGYQGFHVPEGYKDRMYSFFRNFQPMSRQV
VDEINYKDYKAVTLPFQHNNSGFTGYLAPTMRQGQPYPANFPYPLIGQTA
VPSVTQKKFLCDRVMWRIPFSSNFMSMGALTDLGQNMLYANSAHALDMTF
EVDPMDEPTLLYLLFEVFDVVRVHQPHRGVIEAVYLRTPFSAGNATT

Ligand information

>5tx1 Chain Y (length=10) Species: 46928 (Human adenovirus 26) [Search peptide sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

AAAAAAAAAA

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	5tx1 Cryo-EM structure of human adenovirus D26 reveals the conservation of structural organization among human adenoviruses.
Resolution	3.7 Å
Binding residue (original residue number in PDB)	S728 A898 H899
Binding residue (residue number reindexed from 1)	S723 A893 H894

Enzymatic activity

Enzyme Commision number

Gene Ontology

	Molecular Function
GO:0005198	structural molecule activity

	Biological Process
GO:0046718	symbiont entry into host cell
GO:0075521	microtubule-dependent intracellular transport of viral material towards nucleus

	Cellular Component
GO:0019028	viral capsid
GO:0039623	T=25 icosahedral viral capsid
GO:0042025	host cell nucleus
GO:0043657	host cell

View graph for
Molecular Function

View graph for
Biological Process

View graph for
Cellular Component

External links

PDB	RCSB:5tx1, PDBe:5tx1, PDBj:5tx1
PDBsum	5tx1
PubMed	28508067
UniProt	Q3S8B3

[Back to BioLiP]