Structure of PDB 1clz Chain H Binding Site BS03

Receptor Information
>1clz Chain H (length=218) Species: 10090 (Mus musculus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EVNLVESGGGLVQPGGSLKVSCVTSGFTFSDYYMYWVRQTPEKRLEWVAY
ISQGGDITDYPDTVKGRFTISRDNAKNSLYLQMSRLKSEDTAMYYCARGL
DDGAWFAYWGQGTLVTVSVTTTAPSVYPLVPGCSDTSGSSVTLGCLVKGY
FPEPVTVKWNYGALSSGVRTVSSVLQSGFYSLSSLVTVPSSTWPSQTVIC
NVAHPASKTELIKRIEPR
Ligand information
Ligand IDNON
InChIInChI=1S/C10H20O2/c1-3-4-5-6-7-8-9-10(11)12-2/h3-9H2,1-2H3
InChIKeyIJXHLVMUNBOGRR-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341
OpenEye OEToolkits 1.5.0		CCCCCCCCC(=O)OC
ACDLabs 10.04O=C(OC)CCCCCCCC
FormulaC10 H20 O2
NameMETHYL NONANOATE (ESTER)
ChEMBLCHEMBL1234788
DrugBankDB01631
ZINCZINC000002039285
PDB chain1clz Chain H Residue 236 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1clz The x-ray structure of an anti-tumour antibody in complex with antigen.
Resolution2.8 Å
Binding residue
(original residue number in PDB)		D31 Y32 Q52A D97
Binding residue
(residue number reindexed from 1)		D31 Y32 Q53 D101
Annotation score1
Enzymatic activity
Enzyme Commision number ?
External links
PDB RCSB:1clz, PDBe:1clz, PDBj:1clz
PDBsum1clz
PubMed7664109
UniProtP03987|IGHG3_MOUSE Ig gamma-3 chain C region

[Back to BioLiP]