Structure of PDB 7yzm Chain G Binding Site BS03

Receptor Information
>7yzm Chain G (length=243) Species: 246194 (Carboxydothermus hydrogenoformans Z-2901) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MFAGLDLGSTNSKLVIIKEDGSYTFKVVPTRYEPVKAGELLLKNTGEIRN
LVVTGYGRVAFNRGKVVTEITCQARGCHELFPEVDYILDLGGQDAKIIKK
DGQGRVVNFLMNDKCAAGTGRFLEIILTAIGDDYRDEDLINEENAVPINS
MCTVFAESEVISLLARGTSKRAVIAGLFKTTAKRLAKFAESLGKPRKLIF
TGGGAKYPALRLFLQKEMGVEVVVPPEPSVTAALGAALIARET
Ligand information
Ligand IDBU3
InChIInChI=1S/C4H10O2/c1-3(5)4(2)6/h3-6H,1-2H3/t3-,4-/m1/s1
InChIKeyOWBTYPJTUOEWEK-QWWZWVQMSA-N
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0C[C@H]([C@@H](C)O)O
CACTVS 3.341C[C@@H](O)[C@@H](C)O
ACDLabs 10.04OC(C)C(O)C
OpenEye OEToolkits 1.5.0CC(C(C)O)O
CACTVS 3.341C[CH](O)[CH](C)O
FormulaC4 H10 O2
Name(R,R)-2,3-BUTANEDIOL
ChEMBL
DrugBank
ZINCZINC000000901616
PDB chain7yzm Chain G Residue 306 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7yzm Structural basis for coupled ATP-driven electron transfer in the double-cubane cluster protein.
Resolution1.82 Å
Binding residue
(original residue number in PDB)
A95 A116 T119 R184 F188
Binding residue
(residue number reindexed from 1)
A95 A116 T119 R184 F188
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000166 nucleotide binding
GO:0046872 metal ion binding
GO:0051539 4 iron, 4 sulfur cluster binding

View graph for
Molecular Function
External links
PDB RCSB:7yzm, PDBe:7yzm, PDBj:7yzm
PDBsum7yzm
PubMed35905315
UniProtQ3AET8

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