Structure of PDB 6c66 Chain G Binding Site BS03

Receptor Information
>6c66 Chain G (length=832) Species: 269800 (Thermobifida fusca YX) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PPLDLRFWAKERGLRGKTYPLVCHSLDAAAAALVLWNEYLSPGLRDTIAS
SMETDEEHAGHCIAFWAGLHDIGKLTREFQQQIAIDLSAYPGEELSGEQR
SHAAATGKWLPFALPSLGYPNGGLVTGLVAQMLGGHHGTFHPHPSFQSRN
PLAEFGFSSPHWEKQRHALLHAVFDATGRPTPPDMLDGPTASVVCGLVIL
ADWLVSQEDFLLERLTSLPADGSASALRAHFETSLRRIPSLLDAAGLKPN
GLQASLAKHLPCLCTGPGLVLITAPMGEGKTEAAYHVADLLGKATGRPGR
FLALPTMATADQMHTRLKEYAMGRKRGLLAPWAVGTIDQALMAVLRAKHN
ALRLFGLAGKVVVVDEAHAVDPYMQVLLEQLLRWLGTLDVPVVLLSATLH
HSIANSLVKAYLEGARGRRWNRSEPQPVSEVSYPGWLHVDARIGKVTRSS
DVDPLPIATTPRKPLEVRLVDVPVKEGALNRSTVLAKELTPLVKQAAIIC
TTVAEAQGVYDLLSQWFATLPDLYLLHSRFPNRQRTEITATIVDLFGKEG
AQSGRRPTVLVATQVVEQSLDLDVDLMISDLAPVSLLLQRAGRCWRHEHL
GIINRPQWAKQPELVVLTPEQNRAPWFPRSWTSVYPLALLQRTYTLLRRR
NGAPVQIPEDVQQLVDDVYDDDSLAEDLEADMERMGEELAQRGLARNAVI
PDPDDAEDNLNGLTEFATRFGAGSVRVLCYYVGNRWLDPECTVEFPEQGT
GREGRFTMADCRDLVARTIPVRMGPWASQLTEDNHPPEAWRESFYLRDLV
LIPQRVTDEGAVLPTETGGREWLLDPCKGLIF
Ligand information
Ligand IDFE
InChIInChI=1S/Fe/q+3
InChIKeyVTLYFUHAOXGGBS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
CACTVS 3.341
OpenEye OEToolkits 1.5.0		[Fe+3]
FormulaFe
NameFE (III) ION
ChEMBL
DrugBankDB13949
ZINC
PDB chain6c66 Chain G Residue 1002 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6c66 Structure basis for RNA-guided DNA degradation by Cascade and Cas3.
Resolution3.66 Å
Binding residue
(original residue number in PDB)		H37 H83 D84 D215
Binding residue
(residue number reindexed from 1)		H24 H70 D71 D202
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003724 RNA helicase activity
GO:0005524 ATP binding
GO:0016787 hydrolase activity
GO:0046872 metal ion binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0051607 defense response to virus
Cellular Component
GO:0005829 cytosol

View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6c66, PDBe:6c66, PDBj:6c66
PDBsum6c66
PubMed29880725
UniProtQ47PJ0

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