Structure of PDB 8s1p Chain F Binding Site BS03

Receptor Information
>8s1p Chain F (length=178) Species: 224308 (Bacillus subtilis subsp. subtilis str. 168) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
NRLKEKYNKEIAPALMTKFNYDSVMQVPKIEKIVINMGVGDAVQNAKAID
SAVEELTFIAGQKPVVTRAKKSIAGFRLREGMPIGAKVTLRGERMYDFLD
KLISVSLPRVRDFRGVSKKSFDGRGNYTLGIKEQLIFPEIDYDKVTKVRG
MDIVIVTTANTDEEARELLTQVGMPFQK
Ligand information
>8s1p Chain a (length=69) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ggggccuuagcucaggggagagcgccugcucgcaggaggucagcgguucg
aucccgcuaggcuccacca
<<<<<<<..<<<<......>>>>.<<<<<..>>>>>.....<<<<<....
...>>>>>>>>>>>>....
Receptor-Ligand Complex Structure
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PDB8s1p A role for the S4-domain containing protein YlmH in ribosome-associated quality control in Bacillus subtilis.
Resolution1.96 Å
Binding residue
(original residue number in PDB)		S73 A75
Binding residue
(residue number reindexed from 1)		S72 A74
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0000049 tRNA binding
GO:0003723 RNA binding
GO:0003735 structural constituent of ribosome
GO:0019843 rRNA binding
Biological Process
GO:0006412 translation
Cellular Component
GO:0005840 ribosome
GO:0022625 cytosolic large ribosomal subunit
GO:1990904 ribonucleoprotein complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8s1p, PDBe:8s1p, PDBj:8s1p
PDBsum8s1p
PubMed38811035
UniProtP12877|RL5_BACSU Large ribosomal subunit protein uL5 (Gene Name=rplE)

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