Structure of PDB 4xln Chain F Binding Site BS03
Receptor Information
>4xln Chain F (length=347) Species:
271
(Thermus aquaticus) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
TSDPVRQYLHEIGQVPLLTLEEEIDLARKVEEGMEAIKKLSEATGLDQEL
IREVVRAKILGTARIQKIPGLKEKPDPKTVEEVDGKLKSLPKELKRYLHI
AREGEAARQHLIEANLRLVVSIAKKYTGRGLSFLDLIQEGNQGLIRAVEK
FEYKRRFKFSTYATWWIRQAINRAIADQARTIRIPVHMVETINKLSRTAR
QLQQELGREPSYEEIAEAMGPGWDAKRVEETLKIAQEPVSLETPIGDEKD
SFYGDFIPDENLPSPVEAAAQSLLSEELEKALSKLSEREAMVLKLRKGLI
DGREHTLEEVGAYFGVTRERIRQIENKALRKLKYHESRTRKLRDFLE
Ligand information
>4xln Chain Q (length=4) [
Search RNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
ucga
....
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
4xln
Structure of a bacterial RNA polymerase holoenzyme open promoter complex.
Resolution
4.0 Å
Binding residue
(original residue number in PDB)
D338 E339
Binding residue
(residue number reindexed from 1)
D247 E248
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
GO:0003700
DNA-binding transcription factor activity
GO:0016987
sigma factor activity
Biological Process
GO:0006352
DNA-templated transcription initiation
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:4xln
,
PDBe:4xln
,
PDBj:4xln
PDBsum
4xln
PubMed
26349032
UniProt
Q9EZJ8
|SIGA_THEAQ RNA polymerase sigma factor SigA (Gene Name=sigA)
[
Back to BioLiP
]