Structure of PDB 4fc5 Chain F Binding Site BS03

Receptor Information
>4fc5 Chain F (length=269) Species: 523850 (Thermococcus onnurineus NA1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MIAHLINTDIGNRGVLKVYLDYRRKNFNFLHNSTKMFLDNLERVLIVTGF
PIPPMMVAETDGPPGALAIYRAVEMLGGKAEILTYSEVEKALEPFGVSLA
RTPEPEDYSLIISVETPGRAADGRYYSMSALEIKRDPLDGIFLKARALGI
PTIGVGDGGNEIGMGKIRELVVGHVPHGEKIASVVETDELIVSAVSNWGA
YGLVAQASIEVGRNLLEGWDERRVIEAISSAGLIDGVSKTLAPSVDGIRL
MVHEGIVELLKAVVDEAIK
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain4fc5 Chain F Residue 304 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4fc5 Experimental phasing using zinc anomalous scattering
Resolution2.3 Å
Binding residue
(original residue number in PDB)
D61 D157 D246
Binding residue
(residue number reindexed from 1)
D61 D157 D246
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0046872 metal ion binding
GO:0047820 D-glutamate cyclase activity
Biological Process
GO:0006536 glutamate metabolic process

View graph for
Molecular Function

View graph for
Biological Process
External links
PDB RCSB:4fc5, PDBe:4fc5, PDBj:4fc5
PDBsum4fc5
PubMed22948927
UniProtB6YTD8

[Back to BioLiP]