Structure of PDB 4by9 Chain F Binding Site BS03

Receptor Information
>4by9 Chain F (length=366) Species: 2261 (Pyrococcus furiosus) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
FISENVRGIYAFDENGNLIEKRYFTDKPEKVLDQLLKGEITKDLEELLNS
LKEKGYDEFVFEHPELSRRAKELGFSATTEFPNIAGERLRSNPEEFLGEN
WFEEYYKVGVALTRMRIQEQSGARDKMVIQAIEALDDVDKVINLLVARLR
EWYSLHFPELDELLPKHPQYVAFVKTVGHRDNINEEVLRELGLSEEKIKK
ILEAKEKTMGAWMDQTDIEVVRQLAEEIDRLYQLRKKLEDYIDRAMDDVA
PNLKALVGAKLAARLISLAGGLRELAMMPSSTIQVLGAEKALFRHLRTGA
KPPKHGVIYQYPAINRSPWWQRGKIARALAGKLAIAARVDYFSGEYIAEE
LKKELEARIREIKEKY
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB4by9 The Structure of the Box C/D Enzyme Reveals Regulation of RNA Methylation.
ResolutionN/A
Binding residue
(original residue number in PDB)
K175 A291 R294 K304 H305
Binding residue
(residue number reindexed from 1)
K175 A291 R294 K304 H305
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0005515 protein binding
GO:0030515 snoRNA binding
Cellular Component
GO:0031428 box C/D methylation guide snoRNP complex
GO:0032040 small-subunit processome

View graph for
Molecular Function

View graph for
Cellular Component
External links
PDB RCSB:4by9, PDBe:4by9, PDBj:4by9
PDBsum4by9
PubMed24121435
UniProtQ8U4M1

[Back to BioLiP]