Structure of PDB 1jkv Chain F Binding Site BS03

Receptor Information

>1jkv Chain F (length=266) Species: 1590 (Lactiplantibacillus plantarum) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]

MFKHTRKLQYNAKPDRSDPIMARRLQESLGGQWGETTGMMSYLSQGWAST
GAEKYKDLLLDTGTEEMAHVEMISTMIGYLLEDAPFGPEDLKRDPSLATT
MAGMDPEHSLVHGLNASLNNPNGAAWNAGYVTSSGNLVADMRFNVVRESE
ARLQVSRLYSMTEDEGVRDMLKFLLARETQHQLQFMKAQEELEEKYGIIV
PGDMKEIEHSEFSHVLMNFSDGDGSKAFEGQVAKDGEKFTYQENPEAMGG
IPHIKPGDPRLHNHQG

Ligand information

Ligand ID

AZI

InChI

InChI=1S/N3/c1-3-2/q-1

InChIKey

IVRMZWNICZWHMI-UHFFFAOYSA-N

SMILES

Software	SMILES
ACDLabs 10.04 CACTVS 3.341 OpenEye OEToolkits 1.5.0	[N-]=[N+]=[N-]

Formula

Name

AZIDE ION

PDB chain

1jkv Chain F Residue 9281 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]

Receptor-Ligand Complex Structure

Global view

Local view

Structure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

PDB	1jkv Crystal structure of manganese catalase from Lactobacillus plantarum.
Resolution	1.39 Å
Binding residue (original residue number in PDB)	E35 L174 E178
Binding residue (residue number reindexed from 1)	E35 L174 E178
Annotation score	1

Enzymatic activity

Catalytic site (original residue number in PDB)	E35 E66 H69 E148 E178 H181
Catalytic site (residue number reindexed from 1)	E35 E66 H69 E148 E178 H181
Enzyme Commision number	1.11.1.6: catalase.

Gene Ontology

	Molecular Function
GO:0004096	catalase activity
GO:0004601	peroxidase activity
GO:0046872	metal ion binding

	Biological Process
GO:0098869	cellular oxidant detoxification

View graph for
Molecular Function

View graph for
Biological Process

External links

PDB	RCSB:1jkv, PDBe:1jkv, PDBj:1jkv
PDBsum	1jkv
PubMed	11587647
UniProt	P60355\|MCAT_LACPN Manganese catalase

[Back to BioLiP]