Structure of PDB 7pel Chain E Binding Site BS03

Receptor Information
>7pel Chain E (length=278) Species: 33747 (Simian T-lymphotropic virus 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SPAKLHSFTHCGQAALTLHGATTTEALNILHSCHACRKNNPQHQMPRGHI
RRGLLPNHIWQGDITHFKYKNTLYRLHVWVDTFSGSVSATHKKRETSSEA
ISSLLHAIAHLGRPSHINTDNGPAYASQEFQHACTSLAIRHTTHIPYNPT
SSGLVERTNGILKTLLYKYFSDNPNLPMDNALSVALWTINHLNVLTHCQK
TRWQLHHSPRLPPIPEAKPVTTSKTHWYYFKIPGLNSRQWKGPQRALQEA
AGAALIPVSDTAAQWIPWKLLKRAVCPR
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7pel Cryo-EM structure of the deltaretroviral intasome in complex with the PP2A regulatory subunit B56gamma.
Resolution3.34 Å
Binding residue
(original residue number in PDB)
G50 H51 R53 R54 T144 H146 I147 T152 S153 G155 L156 R159 T198 R204 Q250 A252 A253 G254 W267
Binding residue
(residue number reindexed from 1)
G48 H49 R51 R52 T142 H144 I145 T150 S151 G153 L154 R157 T196 R202 Q248 A250 A251 G252 W265
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0008270 zinc ion binding
Biological Process
GO:0015074 DNA integration

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Molecular Function

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Biological Process
External links
PDB RCSB:7pel, PDBe:7pel, PDBj:7pel
PDBsum7pel
PubMed33028863
UniProtQ4QY51

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