Structure of PDB 4s04 Chain E Binding Site BS03

Receptor Information

>4s04 Chain E (length=219) Species: 1380908 (Klebsiella pneumoniae JM45)

MKILVIEDDALLLQGLILAMQSEGYVCDGVSTAHEAALSLASNHYSLIVL
DLGLPDEDGLHFLSRMRREKMTQPVLILTARDTLEDRISGLDTGADDYLV
KPFALEELNARIRALLRRHNNQGDNEISVGNLRLNVTRRLVWLGETALDL
TPKEYALLSRLMMKAGSPVHREILYNDIYSGDNEPATNTLEVHIHNLREK
IGKSRIRTVRGFGYMLANN

Ligand information

• Ligand ID: BEF
• InChI: InChI=1S/Be.3FH/h;3*1H/q+2;;;/p-3
• InChIKey: OGIAHMCCNXDTIE-UHFFFAOYSA-K
• SMILES:
  OpenEye OEToolkits 1.5.0: [Be-](F)(F)F
  ACDLabs 10.04
  CACTVS 3.341: F[Be-](F)F
• Formula: Be F3
• Name: BERYLLIUM TRIFLUORIDE ION
• PDB chain: 4s04 Chain E Residue 301

Receptor-Ligand Complex Structure

Structure summary

• PDB: 4s04 Structure and dynamics of polymyxin-resistance-associated response regulator PmrA in complex with promoter DNA.
• Resolution: 3.2 Å
• Binding residue (original residue number in PDB): D51 G53 T79 A80 K101
• Binding residue (residue number reindexed from 1): D51 G53 T79 A80 K101
• Annotation score: 1

Gene Ontology

Molecular Function

• GO:0000156 phosphorelay response regulator activity
• GO:0000976 transcription cis-regulatory region binding
• GO:0003677 DNA binding
• GO:0046872 metal ion binding

Biological Process

• GO:0000160 phosphorelay signal transduction system
• GO:0006355 regulation of DNA-templated transcription

Cellular Component

• GO:0005829 cytosol
• GO:0032993 protein-DNA complex

External links

• PDB: RCSB:4s04, PDBe:4s04, PDBj:4s04
• PDBsum: 4s04
• PubMed: 26564787
• UniProt: A0A0R4I965