Structure of PDB 8yo4 Chain D Binding Site BS03

Receptor Information
>8yo4 Chain D (length=284) Species: 2681598 (Escherichia phage T4) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KVHKHIKANLCGKDADTTLFLTEGDSAIGYLIDVRDKELHGGYPLRGKVL
NSWGMSYADMLKNKELFDICAITGLVLGEKAFEEKEDGEWFTFELNGDTI
IVNENDEVQINGKWITVGELRKNLMKFVKIDSSSVDMKKYKLQNNVRRSI
KSSSMNYANVAIMTDADHDGLGSIYPSLLGFFSNWPELFEQGRIRFVKTP
VIIAQVGKKQEWFYTVAEYESAKDALPKHSIRYIKGLGSLEKSEYREMIQ
NPVYDVVKLPENWKELFEMLMGDNADLRKEWMSQ
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain8yo4 Chain D Residue 702 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8yo4 structure of phage T4 topoisomerase II central domain bound with DNA
Resolution3.2 Å
Binding residue
(original residue number in PDB)		E415 D559
Binding residue
(residue number reindexed from 1)		E23 D167
Annotation score4
External links