Structure of PDB 8sjd Chain D Binding Site BS03

Receptor Information
>8sjd Chain D (length=479) Species: 7370 (Musca domestica) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
RELKTVSADCKKEAIEKCAQWVVRDCRPFSAVSGSGFIDMIKFFIKVGAE
YGEHVNVEELLPSPITLSRKVTSDAKEKKALISREIKSAVEKDGASATID
LWTDNYIKRNFLGVTLHYHENNELRDLILGLKSLDFERSTAENIYKKLKA
IFSQFNVEDLSSIKFVTDRGANVVKSLANNIRINCSSHLLSNVLENSFEE
TPELNMPILACKNIVKYFKKANLQHRLRSSLKSECPTRWNSTYTMLRSIL
DNWESVIQILSEAGETQRIVHINKSIIQTMVNILDGFERIFKELQTCSSP
SLCFVVPSILKVKEICSPDVGDVADIAKLKVNIIKNVRIIWEENLSIWHY
TAFFFYPPALHMQQEKVAQIKEFCLSKMEDLESREPPVCPSDEFEFYRKE
IVILSEDFKVMEWWNLNSKKYPKLSKLALSLLSIPASSAASERTFSLAGN
IITEKRNRIGQQTVDSLLFLNSFYKNFCK
Ligand information
>8sjd Chain G (length=55) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
cttatctatgtggcttacgtttgcctgtggcttgttgaagttctctggtt
cacgc
Receptor-Ligand Complex Structure
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PDB8sjd Zinc-finger BED domains drive the formation of the active Hermes transpososome by asymmetric DNA binding.
Resolution5.1 Å
Binding residue
(original residue number in PDB)		F109 S110 Q375 C377 R573 N580
Binding residue
(residue number reindexed from 1)		F29 S30 Q295 C297 R443 N450
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0046872 metal ion binding
GO:0046983 protein dimerization activity
Biological Process
GO:0006357 regulation of transcription by RNA polymerase II
Cellular Component
GO:0005634 nucleus

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8sjd, PDBe:8sjd, PDBj:8sjd
PDBsum8sjd
PubMed37491363
UniProtQ25438

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