Structure of PDB 8c61 Chain D Binding Site BS03

Receptor Information
>8c61 Chain D (length=320) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
SKGLSNEPGQNSCFLNSALQVLWHLDIFRRSFRQLTTHKCMGDSCIFCAL
KGIFNQFQCSSEKVLPSDTLRSALAKTFQDEQRFQLGIMDDAAECFENLL
MRIHFHIADETKEDICTAQHCISHQKFAMTLFEQCVCTSCGATSDPLPFI
QMVHYISTTSLCNQAICSMFGELLQNASTMGDLRNCPSNCGERIRIRRVL
MNAPQIITIGLVWDSDHSDLAEDVIHSLGTCLKLGDLFFRVTDDRAKQSE
LYLVGMICYYGKHYSTFFFQTKIRKWMYFDDAHVKEIGPKWKDVVTKCIK
GHYQPLLLLYADPQGTPVST
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain8c61 Chain D Residue 803 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB8c61 Structure of USP54 in complex with Lys63 linked diUbiquitin-PA
Resolution2.5 Å
Binding residue
(original residue number in PDB)		C166 C169 C225 C229
Binding residue
(residue number reindexed from 1)		C137 C140 C186 C190
Annotation score4
External links
PDB RCSB:8c61, PDBe:8c61, PDBj:8c61
PDBsum8c61
PubMed
UniProtQ70EL1|UBP54_HUMAN Ubiquitin carboxyl-terminal hydrolase 54 (Gene Name=USP54)

[Back to BioLiP]