Structure of PDB 7ptr Chain D Binding Site BS03

Receptor Information
>7ptr Chain D (length=725) Species: 309800 (Haloferax volcanii DS2) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ERGNLDADSESFNKTIQSGDRVFLGEEISTDAGLGASNPLLTGTAGNSEG
VSLDLSSPIPQTTENQPLGTYDVDGSGSATTPNVTLLAPRITDSEILTSS
GGDVTGSAISSSDAGNLYVNADYNYESAEKVEVTVEDPSGTDITNEVLSG
TDTFVDDGSIGSTSSTGGGVGIDMSDQDAGEYTIILEGAEDLDFGDATET
MTLTISSQDEIGIELDSESVTQGTDVQYTVTNGIDGNEHVVAMDLSDLQN
DATTEQAKEVFRNIGDTSEVGIANSSATNTSGSSTGPTVETADIAYAVVE
IDGASAVGGIETQYLDDSEVDLEVYDAGVSATAAVGQDATNDITLTIEEG
GTTLSSPTGQYVVGSEVDINGTATSSDSVAIYVRDDGDWQLLEIGGDNEI
SVDSDDTFEEEDIALSGLSGDGSSILSLTGTYRIGVIDASDADVGGDGSV
DDSLTTSEFTSGVSSSNSIRVTDQALTGQFTTINGQVAPVETGTVDINGT
ASGANSVLVIFVDERGNVNYQEVSVDSDGTYDEDDITVGLTQGRVTAHIL
SVGRDSAIGDGSLPSGPSNGATLNDLTGYLDTLDQNNNNGEQINELIASE
TVDETASDDLIVTETFRLAESSTSIDSIYPDAAEAAGINPVATGETMVIA
GSTNLKPDDNTISIEVTNEDGTSVALEDTDEWNNDGQWMVEIDTTDFETG
TFTVEADDGDNTDTVNVEVVSERED
Ligand information
Ligand IDCA
InChIInChI=1S/Ca/q+2
InChIKeyBHPQYMZQTOCNFJ-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Ca++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Ca+2]
FormulaCa
NameCALCIUM ION
ChEMBL
DrugBankDB14577
ZINC
PDB chain7ptr Chain D Residue 903 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB7ptr Complete atomic structure of a native archaeal cell surface.
Resolution3.46 Å
Binding residue
(original residue number in PDB)		D594 S596 L597 E634 E638
Binding residue
(residue number reindexed from 1)		D560 S562 L563 E600 E604
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0071555 cell wall organization
Cellular Component
GO:0005576 extracellular region
GO:0005886 plasma membrane
GO:0030115 S-layer

View graph for
Biological Process
View graph for
Cellular Component
External links
PDB RCSB:7ptr, PDBe:7ptr, PDBj:7ptr
PDBsum7ptr
PubMed34818541
UniProtP25062|CSG_HALVD Cell surface glycoprotein (Gene Name=csg)

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