Structure of PDB 6ut5 Chain D Binding Site BS03

Receptor Information
>6ut5 Chain D (length=395) Species: 187878 (Thermococcus gammatolerans) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GHNIKEDYFRVDMLLNKKGQVILYGPPGTGKTWIARKYVVEETNEKTPGN
KWEFITFHQSYSYEEFIEGFRPRTDNEEKIRYVVEDGIFKKIALRALVKG
LFELEDATIGKDKIHRLYILLTKKEPLSPTEYEEYLRLKRYLWELVGGLP
KDKLKNLTPKFYLIIDEINRGNISKIFGELITLLEKDKRLGGENQLIVRL
PYSGEPFAVPPNLYIIGTMNTADRSIALLDVALRRRFAFIEVEPRPEFLE
KENLKKIREKKLKTEDRKRLNEKLNELFSKLGNDNYFLKTLLEKINVRIT
VVKDRDHRIGHSYFLNVETVEDLHHVWYYEVLPLLMEYFYNDWETIKWVL
NEKGKEHGNVFFEKLRLTGPNGEEAYQLKVLEGDAFIGALKRIIS
Ligand information
Ligand IDMG
InChIInChI=1S/Mg/q+2
InChIKeyJLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
SoftwareSMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Mg+2]
CACTVS 3.341[Mg++]
FormulaMg
NameMAGNESIUM ION
ChEMBL
DrugBankDB01378
ZINC
PDB chain6ut5 Chain D Residue 702 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB6ut5 Structural asymmetry governs the assembly and GTPase activity of McrBC restriction complexes
Resolution2.44 Å
Binding residue
(original residue number in PDB)		T222 D356
Binding residue
(residue number reindexed from 1)		T32 D166
Annotation score1
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
GO:0005524 ATP binding
GO:0016887 ATP hydrolysis activity
GO:0046872 metal ion binding

View graph for
Molecular Function
External links
PDB RCSB:6ut5, PDBe:6ut5, PDBj:6ut5
PDBsum6ut5
PubMed33219217
UniProtC5A3Z3

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