Structure of PDB 5y1z Chain D Binding Site BS03

Receptor Information
>5y1z Chain D (length=307) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GRNDFYCWVCHREGQVLCCELCPRVYHAKCLRLTSEPEGDWFCPECEKIT
VAECIETQSKAMTMLTIEQLSYLLKFAIQKMKQPGTDAFQKPVPLEQHPD
YAEYIFHPMDLCTLEKNAKKKMYGCTEAFLADAKWILHNCIIYNGGNHKL
TQIAKVVIKICEHEMNEIEVCPECYLAACQKRDNWFCEPCSNPHPLVWAK
LKGFPFWPAKALRDKDGQVDARFFGQHDRAWVPINNCYLMSKEIPFSVKK
TKSIFNSAMQEMEVYVENIRRKFGVFNYSPFRTPYTPNSQYQMLLDPTNP
SAGTAKI
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5y1z Chain D Residue 503 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB5y1z The Structure of the ZMYND8/Drebrin Complex Suggests a Cytoplasmic Sequestering Mechanism of ZMYND8 by Drebrin
Resolution2.676 Å
Binding residue
(original residue number in PDB)		C255 C258 H278
Binding residue
(residue number reindexed from 1)		C171 C174 H194
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Biological Process
GO:0006355 regulation of DNA-templated transcription

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Biological Process
External links
PDB RCSB:5y1z, PDBe:5y1z, PDBj:5y1z
PDBsum5y1z
PubMed28966017
UniProtQ9ULU4|ZMYD8_HUMAN MYND-type zinc finger-containing chromatin reader ZMYND8 (Gene Name=ZMYND8)

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