Structure of PDB 5jcz Chain D Binding Site BS03

Receptor Information
>5jcz Chain D (length=173) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
DDEYDYLFKVVLIGDSGVGKSNLLSRFTRNEFNLESKSTIGVEFATRSIQ
VDGKTIKAQIWDTAGQERYRAITSAYYRGAVGALLVYDIAKHLTYENVER
WLKELRDHADSNIVIMLVGNKSDLRHLRAVPTDEARAFAEKNGLSFIETS
ALDSTNVEAAFQTILTEIYRIVS
Ligand information
Ligand IDBEF
InChIInChI=1S/Be.3FH/h;3*1H/q+2;;;/p-3
InChIKeyOGIAHMCCNXDTIE-UHFFFAOYSA-K
SMILES
SoftwareSMILES
OpenEye OEToolkits 1.5.0[Be-](F)(F)F
ACDLabs 10.04
CACTVS 3.341		F[Be-](F)F
FormulaBe F3
NameBERYLLIUM TRIFLUORIDE ION
ChEMBL
DrugBank
ZINC
PDB chain5jcz Chain D Residue 203 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5jcz Coordinated recruitment of Spir actin nucleators and myosin V motors to Rab11 vesicle membranes.
Resolution2.056 Å
Binding residue
(original residue number in PDB)		S20 K24 S42 T43 A68
Binding residue
(residue number reindexed from 1)		S16 K20 S38 T39 A64
Annotation score1
Enzymatic activity
Enzyme Commision number 3.6.5.2: small monomeric GTPase.
Gene Ontology
Molecular Function
GO:0003924 GTPase activity
GO:0005525 GTP binding

View graph for
Molecular Function
External links
PDB RCSB:5jcz, PDBe:5jcz, PDBj:5jcz
PDBsum5jcz
PubMed27623148
UniProtP62491|RB11A_HUMAN Ras-related protein Rab-11A (Gene Name=RAB11A)

[Back to BioLiP]