Structure of PDB 5i44 Chain D Binding Site BS03
Receptor Information
>5i44 Chain D (length=67) Species:
224308
(Bacillus subtilis subsp. subtilis str. 168) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
GSHMNTNMVASELGVSAKTVQRWVKQLNLPAERNELGHYSFTAEDVKVLK
SVKKQISEGTAIQDIHL
Ligand information
>5i44 Chain W (length=14) [
Search DNA sequence
] [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
tgacgccggcgtca
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5i44
Molecular insights into DNA binding and anchoring by the Bacillus subtilis sporulation kinetochore-like RacA protein.
Resolution
2.621 Å
Binding residue
(original residue number in PDB)
T7 N8 K19 Q22 K26 R34 G38 H39 Y40
Binding residue
(residue number reindexed from 1)
T6 N7 K18 Q21 K25 R33 G37 H38 Y39
Binding affinity
PDBbind-CN
: Kd=9.2uM
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003677
DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5i44
,
PDBe:5i44
,
PDBj:5i44
PDBsum
5i44
PubMed
27085804
UniProt
P45870
|RACA_BACSU Chromosome-anchoring protein RacA (Gene Name=racA)
[
Back to BioLiP
]