Structure of PDB 5d5v Chain D Binding Site BS03
Receptor Information
>5d5v Chain D (length=107) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SNVPAFLTKLWTLVSDPDTDALICWSPSGNSFHVFDQGQFAKEVLPKYFK
HNNMASFVRQLNMYGFRKVVHIEQGGVKPERDDTEFQHPCFLRGQEQLLE
NIKRKVT
Ligand information
Ligand ID
MG
InChI
InChI=1S/Mg/q+2
InChIKey
JLVVSXFLKOJNIY-UHFFFAOYSA-N
SMILES
Software
SMILES
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Mg+2]
CACTVS 3.341
[Mg++]
Formula
Mg
Name
MAGNESIUM ION
ChEMBL
DrugBank
DB01378
ZINC
PDB chain
5d5v Chain D Residue 201 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5d5v
Structure of human heat-shock transcription factor 1 in complex with DNA.
Resolution
2.55 Å
Binding residue
(original residue number in PDB)
L25 V26 D28 T31 D32 I35
Binding residue
(residue number reindexed from 1)
L13 V14 D16 T19 D20 I23
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0003700
DNA-binding transcription factor activity
GO:0043565
sequence-specific DNA binding
Biological Process
GO:0006355
regulation of DNA-templated transcription
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:5d5v
,
PDBe:5d5v
,
PDBj:5d5v
PDBsum
5d5v
PubMed
26727489
UniProt
Q00613
|HSF1_HUMAN Heat shock factor protein 1 (Gene Name=HSF1)
[
Back to BioLiP
]