Structure of PDB 5ch7 Chain D Binding Site BS03
Receptor Information
>5ch7 Chain D (length=327) Species:
640081
(Azospira oryzae PS) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
APRRQLTYVTDLNKCIGCQTCTVACKKLWTTGPGQDFMYWRNVETAPGLG
YPRNWQTKGGGYKNGELQKGKIPPMIDYGIPFEFDYAGRLFEGKPGRVRP
SPTPRSAPNWDEDQGAGEYPNNSFFYLPRMCNHCTKPACLEACPNEAIYK
REQDGIVVIHQDKCKGAQACVQSCPYAKPYFNPLTNKANKCIGCFPRIEQ
GVAPACVAQCVGRAMHVGFVDDVNSSVYKLIKQYKVALPLHPEFGTEPNV
FYVPPVLGPRIEMANGEPSTDPKIPLAQLEGLFGKQVRDVLAILQSEREK
KMKGLASDLMDVLIGRRSTDMMISPLT
Ligand information
Ligand ID
SF4
InChI
InChI=1S/4Fe.4S
InChIKey
LJBDFODJNLIPKO-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 2.0.7
[S]12[Fe]3[S]4[Fe]1[S]5[Fe]2[S]3[Fe]45
CACTVS 3.385
S1[Fe]S[Fe]1.S2[Fe]S[Fe]2
Formula
Fe4 S4
Name
IRON/SULFUR CLUSTER
ChEMBL
DrugBank
ZINC
PDB chain
5ch7 Chain D Residue 404 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
5ch7
Perchlorate Reductase Is Distinguished by Active Site Aromatic Gate Residues.
Resolution
2.2 Å
Binding residue
(original residue number in PDB)
C21 I22 G23 C24 C27 R47 V49 P134 C216 V217 G218
Binding residue
(residue number reindexed from 1)
C15 I16 G17 C18 C21 R41 V43 P128 C210 V211 G212
Annotation score
4
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0009055
electron transfer activity
GO:0046872
metal ion binding
GO:0051536
iron-sulfur cluster binding
GO:0051538
3 iron, 4 sulfur cluster binding
GO:0051539
4 iron, 4 sulfur cluster binding
Biological Process
GO:0009061
anaerobic respiration
Cellular Component
GO:0016020
membrane
GO:0042597
periplasmic space
View graph for
Molecular Function
View graph for
Biological Process
View graph for
Cellular Component
External links
PDB
RCSB:5ch7
,
PDBe:5ch7
,
PDBj:5ch7
PDBsum
5ch7
PubMed
26940877
UniProt
G8QM54
[
Back to BioLiP
]