Structure of PDB 1v15 Chain D Binding Site BS03

Receptor Information
>1v15 Chain D (length=133) Species: 562 (Escherichia coli) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
ESKRNKPGKATGKGKPVGDKWLDDAGKDSGAPIPDRIADKLRDKEFKSFD
DFRKAVWEEVSKDPELSKNLNPSNKSSVSKGYSPFTPKNQQVGGRKVYEL
HADKPISQGGEVYDMDNIRVTTPKRHIDIHRGK
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB1v15 Structure-Based Analysis of the Metal-Dependent Mechanism of H-N-H Endonucleases
Resolution2.4 Å
Binding residue
(original residue number in PDB)		L23 D24 N70 L71 N72 N75 F86 T87 P88 K89 Q92 Y99
Binding residue
(residue number reindexed from 1)		L22 D23 N69 L70 N71 N74 F85 T86 P87 K88 Q91 Y98
Enzymatic activity
Catalytic site (original residue number in PDB) R5 R96 E100 H102 A103 H127 H131
Catalytic site (residue number reindexed from 1) R4 R95 E99 H101 A102 H126 H130
Enzyme Commision number 3.1.-.-
Gene Ontology
Molecular Function
GO:0004519 endonuclease activity
GO:0005102 signaling receptor binding
Biological Process
GO:0009617 response to bacterium
GO:0019835 cytolysis

View graph for
Molecular Function
View graph for
Biological Process
External links
PDB RCSB:1v15, PDBe:1v15, PDBj:1v15
PDBsum1v15
PubMed15190054
UniProtP09883|CEA9_ECOLX Colicin-E9 (Gene Name=col)

[Back to BioLiP]