Structure of PDB 8pvk Chain Ce Binding Site BS03

Receptor Information
>8pvk Chain Ce (length=313) Species: 759272 (Thermochaetoides thermophila DSM 1495) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
VLKPLTGDNTEAPKQHSQPSRKGKKAWRKNIDLTEVEQGLEELNEQIIKG
GLKADEIIAQRSALPAVSVRKRAGTYDPWAPDPLKKPKTLEQKPISLAAN
GKSVPAVPKPTGGYSYNPAFTDYQQRLMEESEKAIEAERKRLQELELERQ
KMEAAARSAAEAEAAEARAEKPRRKTKAERNRIKRRKEEERKRKHEEAMK
RKQQQLEQAKKIAAEVEERERQLALQKIEEGDDTVLRRKQLGKFKLPEKD
LELVLPDELEDSLRRLKPEGNLLKDRYRSMIVRGKLEARRKIPFRKQAKT
KLTEKWTFKDFRI
Ligand information
>8pvk Chain C3 (length=82) [Search RNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
uucaaccaucaagcccugggcuuguguuggggacccgcggcugcucgcgg
gcccugaaaagcaguggcgggcgugccagccg
.........<<<<<.....>>>>>....<<<<.<<<<<<<....>>>>>>
>>>>>.........<<<<<<<..>.>>.>>>>
Receptor-Ligand Complex Structure
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PDB8pvk Structural insights into coordinating 5S RNP rotation with ITS2 pre-RNA processing during ribosome formation.
Resolution2.55 Å
Binding residue
(original residue number in PDB)		K87 I91
Binding residue
(residue number reindexed from 1)		K53 I57
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008097 5S rRNA binding
Biological Process
GO:0000027 ribosomal large subunit assembly
GO:0006364 rRNA processing
GO:0042254 ribosome biogenesis
Cellular Component
GO:0005634 nucleus
GO:0005654 nucleoplasm
GO:0005730 nucleolus

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8pvk, PDBe:8pvk, PDBj:8pvk
PDBsum8pvk
PubMed37921038
UniProtG0S495

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