Structure of PDB 8rsk Chain C Binding Site BS03

Receptor Information
>8rsk Chain C (length=262) Species: 66851 (Methanobrevibacter oralis) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
GPMNNDEQLEFLINYLLDERSESIDIPKTFSEKRNLLRSLMNMRHPSNIS
EEFLRIQDEFLSRETANKNLTSVEDISLSSGKIMLWQGDITTLSADAIVN
AANSKLLGCFIPMHNCIDNIIHSASGLQLREECNRMIMLQGGDEDVGKAK
ITNAYNLPSKYVVHTVGPSIERGMRVSSDDVKKLERCYNSCLELASEYKL
NSIAFCCISTGVFNFPQKKAAEIAIRTVKDFLNSNETSLNHIIFDVFTDK
DYDIYKKLLFGN
Ligand information
Ligand IDA1H20
InChIInChI=1S/C19H29N7O16P2/c20-6(19(32)33)1-9(27)25-17-13(30)11(28)7(40-17)2-38-43(34,35)42-44(36,37)39-3-8-12(29)14(31)18(41-8)26-5-24-10-15(21)22-4-23-16(10)26/h4-8,11-14,17-18,28-31H,1-3,20H2,(H,25,27)(H,32,33)(H,34,35)(H,36,37)(H2,21,22,23)
InChIKeyIIHQVAIQZCEYCA-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.385N[CH](CC(=O)N[CH]1O[CH](CO[P](O)(=O)O[P](O)(=O)OC[CH]2O[CH]([CH](O)[CH]2O)n3cnc4c(N)ncnc34)[CH](O)[CH]1O)C(O)=O
CACTVS 3.385N[C@H](CC(=O)N[C@@H]1O[C@H](CO[P](O)(=O)O[P](O)(=O)OC[C@@H]2O[C@@H]([C@H](O)[C@@H]2O)n3cnc4c(N)ncnc34)[C@H](O)[C@@H]1O)C(O)=O
OpenEye OEToolkits 2.0.7c1nc(c2c(n1)n(cn2)C3C(C(C(O3)COP(=O)(O)OP(=O)(O)OCC4C(C(C(O4)NC(=O)CC(C(=O)O)N)O)O)O)O)N
OpenEye OEToolkits 2.0.7c1nc(c2c(n1)n(cn2)[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)OP(=O)(O)OC[C@@H]4[C@H]([C@H]([C@H](O4)NC(=O)C[C@@H](C(=O)O)N)O)O)O)O)N
FormulaC19 H29 N7 O16 P2
Name(2~{S})-4-[[(2~{S},3~{R},4~{S},5~{R})-5-[[[[(2~{R},3~{S},4~{R},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-oxidanyl-phosphoryl]oxy-oxidanyl-phosphoryl]oxymethyl]-3,4-bis(oxidanyl)oxolan-2-yl]amino]-2-azanyl-4-oxidanylidene-butanoic acid
ChEMBL
DrugBank
ZINC
PDB chain8rsk Chain C Residue 303 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8rsk Evolutionary and molecular basis of ADP-ribosylation reversal by zinc-dependent macrodomains
Resolution2.359 Å
Binding residue
(original residue number in PDB)
I88 A99 N101 C107 H112 C114 I115 D116 C205 S207 T208 G209 V210 F211 F245
Binding residue
(residue number reindexed from 1)
I90 A101 N103 C109 H114 C116 I117 D118 C207 S209 T210 G211 V212 F213 F247
Annotation score1
External links