Structure of PDB 8gzh Chain C Binding Site BS03

Receptor Information
>8gzh Chain C (length=1052) Species: 1148 (Synechocystis sp. PCC 6803) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PDLIEIQHASFHWFLEEGLIEELNSFSPISDYTGKLELHFLGKDYKLKQP
KYDVDESKRRDASYSVQMYVPTRLINKETGEIKEQEVFIGDLPLMTERGT
FIINGAERVIVNQIVRSPGVYYKKELDKNGRRTYSASLIPNRGAWLKFET
DKNGLVYVRIDKTRKLSAQVLLKAIGLSDNEILDSLSHPEFYQKTLDKEG
NPTEEEALVELYKKLRPPTVSGGQQLLESRFFDPKRYDLGRVGRYKLNKK
LRLNEADTTRVLTPQDILAAINYLINLEFDVGTTDDIDHLGNRRVRSVGE
LLQNQIRVGLNRLERIIRERMTVSESDALTPASLVNPKPLVAAIKEFFGS
SQLSQFMDQTNPLAELTHKRRISALGPGGLTRERAGFAVRDIHPSHHGRI
CPVETPEGPNAGLIGSLATCARVNDYGFIETPYFRVESGRVRKDLDPVYL
TADEEDDMRVAPGDIPTDEEGNIIGESVPIRYRQEFSTTSPEQVDYVAVS
PVQIISVATSMIPFLEHDDANRALMGSNMQRQAVPLLRPERPLVGTGLEA
QAARDSGMVIVSRTHGIVTYVDATEIRVQPHSGEEIVYPIQKYQRSNQDT
CLNQRPLVYAGEDVVPGQVLADGSATEGGELALGQNILVAYMPWEGYNYE
DAILISERLVYDDVYTSIHIEKFEIEARQTKLGPEEITREIPNVGEDALR
NLDEHGIIRIGAWVESGDILVGKVTPKGEADQPPEEKLLRAIFGEKARDV
RDNSLRVPNGEKGRVVDVRVFTREKGDELPPGANMVVRIYVAQKRKIQVG
DKMAGRHGNKGIISRILPIEDMPYLPDGRPIDIALNPLGVPSRMNVGQVF
ECLLGWAGENLGVRFKITPFDEMYGEEASRDTVHGLLEEASQRPNKDWVF
NENHPGKIQVFDGRTGEPFDRPITVGQAYMLKLVHLVDDKIHARSTGPYS
LVTQQPLGGKAQQGGQRFGEMEVWALEAYGAAYILQELLTVKSDDMQGRN
EALNAIVKGKSIPRPGTPESFKVLMRELQSLGLDIAAHKVQLSEDGESAD
AE
Ligand information
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

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PDB8gzh Cryo-EM structure of Synechocystis sp. PCC 6803 CTP-bound RPitc
Resolution2.96 Å
Binding residue
(original residue number in PDB)		P418 Q544 K821 K829
Binding residue
(residue number reindexed from 1)		P406 Q532 K802 K810
Enzymatic activity
Enzyme Commision number 2.7.7.6: DNA-directed RNA polymerase.
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0003899 DNA-directed 5'-3' RNA polymerase activity
GO:0016779 nucleotidyltransferase activity
GO:0032549 ribonucleoside binding
GO:0034062 5'-3' RNA polymerase activity
Biological Process
GO:0006351 DNA-templated transcription
Cellular Component
GO:0000428 DNA-directed RNA polymerase complex

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:8gzh, PDBe:8gzh, PDBj:8gzh
PDBsum8gzh
PubMed
UniProtP77965|RPOB_SYNY3 DNA-directed RNA polymerase subunit beta (Gene Name=rpoB)

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