Structure of PDB 6voy Chain C Binding Site BS03

Receptor Information
>6voy Chain C (length=276) Species: 11927,273057 [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
PSPAELHSFTHCGQTALTLQGATTTEASNILRSCHACRKNNPQHQMPRGH
IRRGLLPNHIWQGDITHFKYKNTLYRLHVWVDTFSGAISATQKRKETSSE
AISSLLQAIAYLGKPSYINTDNGPAYISQDFLNMCTSLAIRHTTHVPYNP
TSSGLVQRSNGILKTLLYKYFTDKPDLPMDNALSIALWTINHLNVLTNCH
KTRWQLHHSPRLQPIPETRSLSNKQTHWYYFKLPGLNSRQWKGPQEALQE
AAGAALIPVSASSAQWIPWRLLKRAA
Ligand information
>6voy Chain L (length=47) [Search DNA sequence] [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
ccaggagagaaatttagtacacagatatccaccctagtcaagtgtgt
Receptor-Ligand Complex Structure
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PDB6voy Structural basis of host protein hijacking in human T-cell leukemia virus integration.
Resolution3.7 Å
Binding residue
(original residue number in PDB)		K94 E95 Q128
Binding residue
(residue number reindexed from 1)		K95 E96 Q129
Enzymatic activity
Enzyme Commision number ?
2.7.7.-
2.7.7.49: RNA-directed DNA polymerase.
2.7.7.7: DNA-directed DNA polymerase.
3.1.-.-
3.1.26.4: ribonuclease H.
3.4.23.-
Gene Ontology
Molecular Function
GO:0003676 nucleic acid binding
GO:0003677 DNA binding
GO:0004521 RNA endonuclease activity
GO:0008270 zinc ion binding
Biological Process
GO:0015074 DNA integration
Cellular Component
GO:0005737 cytoplasm

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Molecular Function
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Biological Process
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Cellular Component
External links
PDB RCSB:6voy, PDBe:6voy, PDBj:6voy
PDBsum6voy
PubMed32561747
UniProtP14078;
P39476|DN7D_SACS2 DNA-binding protein 7d (Gene Name=sso7d)

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