Structure of PDB 6jx2 Chain C Binding Site BS03
Receptor Information
>6jx2 Chain C (length=324) Species:
196627
(Corynebacterium glutamicum ATCC 13032) [
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AIELLYDADADLSLIQGRKVAIVGYGSQGHAHSQNLRDSGVEVVIGLREG
SKSAEKAKEAGFEVKTTAEAAAWADVIMLLAPDTSQAEIFTNDIEPNLNA
GDALLFGHGLNIHFDLIKPADDIIVGMVAPKGPGHLVRRQFVDGKGVPCL
IAVDQDPTGTAQALTLSYAAAIGGARAGVIPTTFEAETVTDLFGEQAVLC
GGTEELVKVGFEVLTEAGYEPEMAYFEVLHELKLIVDLMFEGGISNMNYS
VSDTAEFGGYLSGPRVIDADTKSRMKDILTDIQDGTFTKRLIANVENGNT
ELEGLRASYNNHPIEETGAKLRDL
Ligand information
Ligand ID
NAP
InChI
InChI=1S/C21H28N7O17P3/c22-17-12-19(25-7-24-17)28(8-26-12)21-16(44-46(33,34)35)14(30)11(43-21)6-41-48(38,39)45-47(36,37)40-5-10-13(29)15(31)20(42-10)27-3-1-2-9(4-27)18(23)32/h1-4,7-8,10-11,13-16,20-21,29-31H,5-6H2,(H7-,22,23,24,25,32,33,34,35,36,37,38,39)/t10-,11-,13-,14-,15-,16-,20-,21-/m1/s1
InChIKey
XJLXINKUBYWONI-NNYOXOHSSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)C2C(C(C(O2)COP(=O)([O-])OP(=O)(O)OCC3C(C(C(O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[CH]2O[CH](CO[P]([O-])(=O)O[P](O)(=O)OC[CH]3O[CH]([CH](O[P](O)(O)=O)[CH]3O)n4cnc5c(N)ncnc45)[CH](O)[CH]2O
CACTVS 3.341
NC(=O)c1ccc[n+](c1)[C@@H]2O[C@H](CO[P]([O-])(=O)O[P@@](O)(=O)OC[C@H]3O[C@H]([C@H](O[P](O)(O)=O)[C@@H]3O)n4cnc5c(N)ncnc45)[C@@H](O)[C@H]2O
OpenEye OEToolkits 1.5.0
c1cc(c[n+](c1)[C@H]2[C@@H]([C@@H]([C@H](O2)CO[P@@](=O)([O-])O[P@](=O)(O)OC[C@@H]3[C@H]([C@H]([C@@H](O3)n4cnc5c4ncnc5N)OP(=O)(O)O)O)O)O)C(=O)N
Formula
C21 H28 N7 O17 P3
Name
NADP NICOTINAMIDE-ADENINE-DINUCLEOTIDE PHOSPHATE;
2'-MONOPHOSPHOADENOSINE 5'-DIPHOSPHORIBOSE
ChEMBL
CHEMBL295069
DrugBank
DB03461
ZINC
PDB chain
6jx2 Chain C Residue 403 [
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Receptor-Ligand Complex Structure
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PDB
6jx2
Crystal Structure and Biochemical Characterization of Ketol-Acid Reductoisomerase fromCorynebacterium glutamicum.
Resolution
2.6 Å
Binding residue
(original residue number in PDB)
G25 Y26 G27 S28 Q29 S52 S54 L81 P83 D84 I90 H109 P134
Binding residue
(residue number reindexed from 1)
G24 Y25 G26 S27 Q28 S51 S53 L80 P82 D83 I89 H108 P133
Annotation score
4
Enzymatic activity
Enzyme Commision number
1.1.1.86
: ketol-acid reductoisomerase (NADP(+)).
Gene Ontology
Molecular Function
GO:0000287
magnesium ion binding
GO:0004455
ketol-acid reductoisomerase activity
GO:0008677
2-dehydropantoate 2-reductase activity
GO:0016491
oxidoreductase activity
GO:0046872
metal ion binding
GO:0050661
NADP binding
Biological Process
GO:0008652
amino acid biosynthetic process
GO:0009082
branched-chain amino acid biosynthetic process
GO:0009097
isoleucine biosynthetic process
GO:0009099
L-valine biosynthetic process
Cellular Component
GO:0005829
cytosol
View graph for
Molecular Function
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Biological Process
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Cellular Component
External links
PDB
RCSB:6jx2
,
PDBe:6jx2
,
PDBj:6jx2
PDBsum
6jx2
PubMed
31298526
UniProt
Q57179
|ILVC_CORGL Ketol-acid reductoisomerase (NADP(+)) (Gene Name=ilvC)
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