Structure of PDB 6cja Chain C Binding Site BS03

Receptor Information
>6cja Chain C (length=381) Species: 272624 (Legionella pneumophila subsp. pneumophila str. Philadelphia 1) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KTHFDTRAIHAGQEPCKSTGAVMTPIYATSTYKQIAPGEHLGYEYSRTQN
PTRKAYEDCIASLESGQKGFAFASGMAAINTVIDLLGSGDHVVAMDDLYG
GTFRLFDKVKTRTSNLSFSFIDMSVPENIEAAITPKTKLLWLETPSNPML
KLANLRKIAAIAKKYNLITVADNTFATPWIQRPLELGFDIVLHSATKYLN
GHSDVVSGVVVVGDNSVLSDKIAFLQNSCGAVAGPFDSFLVLRSLKTLSV
RMQRHCENANHLANWLSSHPKIEKVIYPGLKSHPQYSLAKEQMNNFGGMI
SLVLKGSLEDAKRFLARCELFTLAESLGGVESLIEHPAIMTHASIPVEQR
KALGIEDGFIRLSVGIEHIDDLRADLEHALG
Ligand information
Ligand IDF0G
InChIInChI=1S/C11H15N2O7P/c1-6-10(14)9(4-13-7(2)11(15)16)8(3-12-6)5-20-21(17,18)19/h3-4,7,14H,5H2,1-2H3,(H,15,16)(H2,17,18,19)/b13-4+/t7-/m0/s1
InChIKeyUPOKXKNJCNHZTH-ASMSWWRESA-N
SMILES
SoftwareSMILES
ACDLabs 12.01n1c(c(O)c(\C=N\C(C(O)=O)C)c(COP(O)(O)=O)c1)C
OpenEye OEToolkits 2.0.6Cc1c(c(c(cn1)COP(=O)(O)O)/C=N/[C@@H](C)C(=O)O)O
CACTVS 3.385C[C@H](N=Cc1c(O)c(C)ncc1CO[P](O)(O)=O)C(O)=O
OpenEye OEToolkits 2.0.6Cc1c(c(c(cn1)COP(=O)(O)O)C=NC(C)C(=O)O)O
CACTVS 3.385C[CH](N=Cc1c(O)c(C)ncc1CO[P](O)(O)=O)C(O)=O
FormulaC11 H15 N2 O7 P
Name(E)-N-({3-hydroxy-2-methyl-5-[(phosphonooxy)methyl]pyridin-4-yl}methylidene)-L-alanine;
PLP-Ala
ChEMBL
DrugBank
ZINC
PDB chain6cja Chain D Residue 400 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB6cja Crystal structure of Cystathionine beta-lyase from Legionella pneumophila Philadelphia 1 in complex with Alanyl-PLP and Serine
Resolution1.7 Å
Binding residue
(original residue number in PDB)
Y47 R49
Binding residue
(residue number reindexed from 1)
Y45 R47
Annotation score1
Enzymatic activity
Enzyme Commision number 4.4.1.8: Transferred entry: 4.4.1.13.
Gene Ontology
Molecular Function
GO:0003962 cystathionine gamma-synthase activity
GO:0016829 lyase activity
GO:0016846 carbon-sulfur lyase activity
GO:0030170 pyridoxal phosphate binding
Biological Process
GO:0019346 transsulfuration
Cellular Component
GO:0005737 cytoplasm

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Molecular Function

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Biological Process

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Cellular Component
External links
PDB RCSB:6cja, PDBe:6cja, PDBj:6cja
PDBsum6cja
PubMed
UniProtQ5ZX43

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