Structure of PDB 5w9s Chain C Binding Site BS03

Receptor Information
>5w9s Chain C (length=44) Species: 9606 (Homo sapiens) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
KKRKRCGMCAPCRRRINCEQCSSCRNRKTGHQICKFRKCEELKK
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0
[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain5w9s Chain C Residue 401 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB5w9s DNA Sequence Recognition of Human CXXC Domains and Their Structural Determinants.
Resolution2.1 Å
Binding residue
(original residue number in PDB)
C263 C266 C269 C296
Binding residue
(residue number reindexed from 1)
C6 C9 C12 C39
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0003677 DNA binding
GO:0008270 zinc ion binding

View graph for
Molecular Function
External links
PDB RCSB:5w9s, PDBe:5w9s, PDBj:5w9s
PDBsum5w9s
PubMed29276034
UniProtQ7LFL8|CXXC5_HUMAN CXXC-type zinc finger protein 5 (Gene Name=CXXC5)

[Back to BioLiP]