Structure of PDB 4p86 Chain C Binding Site BS03
Receptor Information
>4p86 Chain C (length=174) Species:
1423
(Bacillus subtilis) [
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QKAVILDEQAIRRALTRIAHEMIERNKGMNNCILVGIKTRGIYLAKRLAE
RIEQIEGNPVTVGEIDITLYRDDLSNDEPLVKGADIPVDITDQKVILVDD
VLYTGRTVRAGMDALVDVGRPSSIQLAVLVDRGHRELPIRADYIGKNIPT
SKSEKVMVQLDEVDQNDLVAIYEN
Ligand information
Ligand ID
5GP
InChI
InChI=1S/C10H14N5O8P/c11-10-13-7-4(8(18)14-10)12-2-15(7)9-6(17)5(16)3(23-9)1-22-24(19,20)21/h2-3,5-6,9,16-17H,1H2,(H2,19,20,21)(H3,11,13,14,18)/t3-,5-,6-,9-/m1/s1
InChIKey
RQFCJASXJCIDSX-UUOKFMHZSA-N
SMILES
Software
SMILES
CACTVS 3.341
NC1=Nc2n(cnc2C(=O)N1)[C@@H]3O[C@H](CO[P](O)(O)=O)[C@@H](O)[C@H]3O
CACTVS 3.341
NC1=Nc2n(cnc2C(=O)N1)[CH]3O[CH](CO[P](O)(O)=O)[CH](O)[CH]3O
ACDLabs 10.04
O=C1c2ncn(c2N=C(N)N1)C3OC(C(O)C3O)COP(=O)(O)O
OpenEye OEToolkits 1.5.0
c1nc2c(n1C3C(C(C(O3)COP(=O)(O)O)O)O)N=C(NC2=O)N
OpenEye OEToolkits 1.5.0
c1nc2c(n1[C@H]3[C@@H]([C@@H]([C@H](O3)COP(=O)(O)O)O)O)N=C(NC2=O)N
Formula
C10 H14 N5 O8 P
Name
GUANOSINE-5'-MONOPHOSPHATE
ChEMBL
CHEMBL283807
DrugBank
DB01972
ZINC
ZINC000002159505
PDB chain
4p86 Chain C Residue 202 [
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Receptor-Ligand Complex Structure
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PDB
4p86
Evolution of oligomeric state through allosteric pathways that mimic ligand binding.
Resolution
1.93 Å
Binding residue
(original residue number in PDB)
K40 D105 D106 V107 Y109 T110 G111 T113 R138 V162
Binding residue
(residue number reindexed from 1)
K38 D99 D100 V101 Y103 T104 G105 T107 R132 V156
Annotation score
4
External links
PDB
RCSB:4p86
,
PDBe:4p86
,
PDBj:4p86
PDBsum
4p86
PubMed
25525255
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