Structure of PDB 4oxd Chain C Binding Site BS03

Receptor Information
>4oxd Chain C (length=167) Species: 171101 (Streptococcus pneumoniae R6) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
EVVNKGDYYSIQGKYDEIIVANKHYPLSKDYNPGENPTAKAELVKLIKAM
QEAGFPISDHYSGFRSYETQTKLYSARPGYSEHQTGLAFDVIGTDGDLVT
EEKAAQWLLDHAADYGFVVRYLKGKEKETGYMAEEWHLRYVGKEAKEIAE
SGLSLEEYYGFEGGDYV
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain4oxd Chain C Residue 302 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
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PDB4oxd Structure of the LdcB LD-carboxypeptidase reveals the molecular basis of peptidoglycan recognition.
Resolution2.8 Å
Binding residue
(original residue number in PDB)		H79 E232
Binding residue
(residue number reindexed from 1)		H24 E162
Annotation score4
Enzymatic activity
Enzyme Commision number ?
Gene Ontology
Molecular Function
GO:0008233 peptidase activity
Biological Process
GO:0006508 proteolysis

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Molecular Function
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Biological Process
External links
PDB RCSB:4oxd, PDBe:4oxd, PDBj:4oxd
PDBsum4oxd
PubMed24909784
UniProtQ8DQQ1

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