Structure of PDB 3u0d Chain C Binding Site BS03
Receptor Information
>3u0d Chain C (length=174) Species:
9606
(Homo sapiens) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
SDLIPAPPLSKVPLQQNFQDNQFQGKWYVVGLAGNAILREDKDPQKMYAT
IYELKEDKSYNVTSVLFRKKKCDYWIRTFVPGSQPGEFTLGNIKSYPGLT
SYLVRVVSTNYNQHAMVFFKKVSQNREYFKITLYGRTKELTSELKENFIR
FSKSLGLPENHIVFPVPIDQCIDG
Ligand information
Ligand ID
DBH
InChI
InChI=1S/C7H6O4/c8-5-3-1-2-4(6(5)9)7(10)11/h1-3,8-9H,(H,10,11)
InChIKey
GLDQAMYCGOIJDV-UHFFFAOYSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.5.0
c1cc(c(c(c1)O)O)C(=O)O
ACDLabs 10.04
O=C(O)c1cccc(O)c1O
CACTVS 3.341
OC(=O)c1cccc(O)c1O
Formula
C7 H6 O4
Name
2,3-DIHYDROXY-BENZOIC ACID
ChEMBL
CHEMBL1432
DrugBank
DB01672
ZINC
ZINC000000388166
PDB chain
3u0d Chain C Residue 182 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3u0d
Siderocalin/Lcn2/NGAL/24p3 does not drive apoptosis through gentisic acid mediated iron withdrawal in hematopoietic cell lines.
Resolution
2.51 Å
Binding residue
(original residue number in PDB)
Y106 K125 K134
Binding residue
(residue number reindexed from 1)
Y102 K121 K130
Annotation score
1
Enzymatic activity
Enzyme Commision number
?
Gene Ontology
Molecular Function
GO:0036094
small molecule binding
View graph for
Molecular Function
External links
PDB
RCSB:3u0d
,
PDBe:3u0d
,
PDBj:3u0d
PDBsum
3u0d
PubMed
22928018
UniProt
P80188
|NGAL_HUMAN Neutrophil gelatinase-associated lipocalin (Gene Name=LCN2)
[
Back to BioLiP
]