Structure of PDB 3kde Chain C Binding Site BS03

Receptor Information
>3kde Chain C (length=74) Species: 7227 (Drosophila melanogaster) [Search protein sequence] [Download receptor structure] [Download structure with residue number starting from 1] [View receptor structure]
MKYCKFCCKAVTGVKLIHVPKCAIKRKLWEQSLGCSLGENSQICDTHFND
SQWKAAKGQTFKRRRLNADAVPSK
Ligand information
Ligand IDZN
InChIInChI=1S/Zn/q+2
InChIKeyPTFCDOFLOPIGGS-UHFFFAOYSA-N
SMILES
SoftwareSMILES
CACTVS 3.341[Zn++]
ACDLabs 10.04
OpenEye OEToolkits 1.5.0		[Zn+2]
FormulaZn
NameZINC ION
ChEMBLCHEMBL1236970
DrugBankDB14532
ZINC
PDB chain3kde Chain C Residue 78 [Download ligand structure] [Download structure with residue number starting from 1] [View ligand structure]
Receptor-Ligand Complex Structure
Global viewLocal viewStructure summary

[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
[Spin on] [Spin off] [Reset]
[High quality] [Low quality]
[White background] [Black background]
PDB3kde THAP proteins target specific DNA sites through bipartite recognition of adjacent major and minor grooves.
Resolution1.74 Å
Binding residue
(original residue number in PDB)		C4 C7 C44 H47 S75 K76
Binding residue
(residue number reindexed from 1)		C4 C7 C44 H47 S73 K74
Annotation score4
Enzymatic activity
Enzyme Commision number 2.7.7.-
External links
PDB RCSB:3kde, PDBe:3kde, PDBj:3kde
PDBsum3kde
PubMed20010837
UniProtQ7M3K2|PELET_DROME Transposable element P transposase (Gene Name=T)

[Back to BioLiP]