Structure of PDB 3amq Chain C Binding Site BS03
Receptor Information
>3amq Chain C (length=256) Species:
2336
(Thermotoga maritima) [
Search protein sequence
] [
Download receptor structure
] [
Download structure with residue number starting from 1
] [
View receptor structure
]
MVLMTKPGTSDFVWNGIPLSMELNLWNIKEYSGSVAMKFDGEKITFDADI
QNLSPKEPERYVLGYPEFYYGYKPWENHTAEGSKLPVPVSSMKSFSVEVS
FDIHHEPSLPLNFAMETWLTREKYQTEASIGDVCIMVWFYFNNLTPGGEK
IEEFTIPFVLNGESVEGTWELWLAEWGWDYLAFRLKDPVKKGRVKFDVRH
FLDAAGKALSSSARVKDFEDLYFTVWEIGTEFGSPETKSAQFGWKFENFS
IDLEVR
Ligand information
Ligand ID
BGC
InChI
InChI=1S/C6H12O6/c7-1-2-3(8)4(9)5(10)6(11)12-2/h2-11H,1H2/t2-,3-,4+,5-,6-/m1/s1
InChIKey
WQZGKKKJIJFFOK-VFUOTHLCSA-N
SMILES
Software
SMILES
OpenEye OEToolkits 1.7.6
C(C1C(C(C(C(O1)O)O)O)O)O
CACTVS 3.370
OC[C@H]1O[C@@H](O)[C@H](O)[C@@H](O)[C@@H]1O
CACTVS 3.370
OC[CH]1O[CH](O)[CH](O)[CH](O)[CH]1O
OpenEye OEToolkits 1.7.6
C([C@@H]1[C@H]([C@@H]([C@H]([C@@H](O1)O)O)O)O)O
ACDLabs 12.01
OC1C(O)C(OC(O)C1O)CO
Formula
C6 H12 O6
Name
beta-D-glucopyranose;
beta-D-glucose;
D-glucose;
glucose
ChEMBL
CHEMBL1614854
DrugBank
DB02379
ZINC
ZINC000003833800
PDB chain
3amq Chain C Residue 902 [
Download ligand structure
] [
Download structure with residue number starting from 1
] [
View ligand structure
]
Receptor-Ligand Complex Structure
Global view
Local view
Structure summary
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
[
Spin on
] [
Spin off
] [
Reset
]
[
High quality
] [
Low quality
]
[
White background
] [
Black background
]
PDB
3amq
Crystal structure and substrate-binding mode of cellulase 12A from Thermotoga maritima
Resolution
1.8 Å
Binding residue
(original residue number in PDB)
R60 W138 T145 P146 G147 W176 Y180 E231
Binding residue
(residue number reindexed from 1)
R60 W138 T145 P146 G147 W176 Y180 E231
Annotation score
4
Enzymatic activity
Enzyme Commision number
3.2.1.4
: cellulase.
Gene Ontology
Molecular Function
GO:0004553
hydrolase activity, hydrolyzing O-glycosyl compounds
GO:0008810
cellulase activity
GO:0016798
hydrolase activity, acting on glycosyl bonds
Biological Process
GO:0000272
polysaccharide catabolic process
View graph for
Molecular Function
View graph for
Biological Process
External links
PDB
RCSB:3amq
,
PDBe:3amq
,
PDBj:3amq
PDBsum
3amq
PubMed
21268113
UniProt
Q60032
[
Back to BioLiP
]